Detailed information NTG0300467

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETL58_RS01740
• Genome accession: NZ_CP035413
• Coordinates: 306355..307476 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103629
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 301355..312476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETL58_RS01715 (ETL58_01715)	ycdA	301360..302424 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
ETL58_RS01720 (ETL58_01720)	-	302447..302578 (-)	132	WP_003246334.1	hypothetical protein	-
ETL58_RS01725 (ETL58_01725)	ycdB	302752..304173 (+)	1422	WP_033883138.1	YcdB/YcdC domain-containing protein	-
ETL58_RS01730 (ETL58_01730)	ycdC	304360..305721 (+)	1362	WP_029317222.1	YcdB/YcdC domain-containing protein	-
ETL58_RS01735 (ETL58_01735)	cwlK	305729..306232 (-)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ETL58_RS01740 (ETL58_01740)	rapF	306355..307476 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
ETL58_RS01745 (ETL58_01745)	ycdF	307583..308359 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
ETL58_RS01750 (ETL58_01750)	ycdG	308384..310069 (+)	1686	WP_101172108.1	alpha-glucosidase	-
ETL58_RS01755 (ETL58_01755)	znuA	310257..311216 (+)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
ETL58_RS01760 (ETL58_01760)	znuC	311271..311966 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=300467 ETL58_RS01740 WP_015715201.1 306355..307476(+) (rapF) [Bacillus subtilis strain SRCM103629]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=300467 ETL58_RS01740 WP_015715201.1 306355..307476(+) (rapF) [Bacillus subtilis strain SRCM103629]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACTCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405