Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ETK71_RS20690 Genome accession   NZ_CP035411
Coordinates   3989625..3990314 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain SRCM103622     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3984625..3995314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK71_RS20670 (ETK71_20670) yxeA 3985530..3985877 (-) 348 WP_129138218.1 YxeA family protein -
  ETK71_RS20675 (ETK71_20675) yxdM 3985891..3987759 (-) 1869 WP_029318589.1 ABC transporter permease YxdM -
  ETK71_RS20680 (ETK71_20680) yxdL 3987734..3988507 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  ETK71_RS20685 (ETK71_20685) yxdK 3988651..3989628 (-) 978 WP_015385109.1 two-component system sensor histidine kinase YxdK -
  ETK71_RS20690 (ETK71_20690) braR 3989625..3990314 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  ETK71_RS20695 (ETK71_20695) iolJ 3990422..3991294 (-) 873 WP_014478478.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  ETK71_RS20700 (ETK71_20700) iolI 3991315..3992151 (-) 837 WP_015715014.1 2-keto-myo-inositol isomerase -
  ETK71_RS20705 (ETK71_20705) iolH 3992237..3993106 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  ETK71_RS20710 (ETK71_20710) iolG 3993126..3994160 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=300449 ETK71_RS20690 WP_003243527.1 3989625..3990314(-) (braR) [Bacillus subtilis strain SRCM103622]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=300449 ETK71_RS20690 WP_003243527.1 3989625..3990314(-) (braR) [Bacillus subtilis strain SRCM103622]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCTGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment