Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | ETK49_RS09505 | Genome accession | NZ_CP035405 |
| Coordinates | 1829327..1829689 (+) | Length | 120 a.a. |
| NCBI ID | WP_003181796.1 | Uniprot ID | A0A6I1MJA4 |
| Organism | Bacillus licheniformis strain SRCM103608 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1824327..1834689
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETK49_RS09475 (ETK49_09475) | flgD | 1825171..1825638 (+) | 468 | WP_003181782.1 | flagellar hook assembly protein FlgD | - |
| ETK49_RS09480 (ETK49_09480) | flgG | 1825666..1826457 (+) | 792 | WP_003181784.1 | flagellar basal body rod protein FlgG | - |
| ETK49_RS09485 (ETK49_09485) | - | 1826500..1826715 (+) | 216 | WP_003181786.1 | flagellar FlbD family protein | - |
| ETK49_RS09490 (ETK49_09490) | fliL | 1826712..1827143 (+) | 432 | WP_003181788.1 | flagellar basal body-associated protein FliL | - |
| ETK49_RS09495 (ETK49_09495) | fliM | 1827179..1828177 (+) | 999 | WP_003181789.1 | flagellar motor switch protein FliM | - |
| ETK49_RS09500 (ETK49_09500) | fliY | 1828167..1829300 (+) | 1134 | WP_003181794.1 | flagellar motor switch phosphatase FliY | - |
| ETK49_RS09505 (ETK49_09505) | pilH | 1829327..1829689 (+) | 363 | WP_003181796.1 | response regulator | Machinery gene |
| ETK49_RS09510 (ETK49_09510) | fliZ | 1829759..1830376 (+) | 618 | WP_228767680.1 | flagella biosynthesis regulatory protein FliZ | - |
| ETK49_RS09515 (ETK49_09515) | fliP | 1830369..1831034 (+) | 666 | WP_009328512.1 | flagellar type III secretion system pore protein FliP | - |
| ETK49_RS09520 (ETK49_09520) | fliQ | 1831050..1831319 (+) | 270 | WP_003181801.1 | flagellar biosynthesis protein FliQ | - |
| ETK49_RS09525 (ETK49_09525) | fliR | 1831327..1832103 (+) | 777 | WP_003181804.1 | flagellar biosynthetic protein FliR | - |
| ETK49_RS09530 (ETK49_09530) | flhB | 1832103..1833182 (+) | 1080 | WP_003181806.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13280.60 Da Isoelectric Point: 4.5762
>NTDB_id=300068 ETK49_RS09505 WP_003181796.1 1829327..1829689(+) (pilH) [Bacillus licheniformis strain SRCM103608]
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=300068 ETK49_RS09505 WP_003181796.1 1829327..1829689(+) (pilH) [Bacillus licheniformis strain SRCM103608]
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.136 |
98.333 |
0.375 |