Detailed information NTG0300032

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ETK49_RS05770
• Genome accession: NZ_CP035405
• Coordinates: 1120108..1121226 (+)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SRCM103608
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1115108..1126226

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETK49_RS05745 (ETK49_05745)	-	1115310..1116815 (+)	1506	WP_020450779.1	coproporphyrinogen III oxidase	-
ETK49_RS05750 (ETK49_05750)	-	1116895..1118106 (-)	1212	WP_016886432.1	cation:proton antiporter	-
ETK49_RS05755 (ETK49_05755)	-	1118113..1118610 (-)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
ETK49_RS05760 (ETK49_05760)	-	1118675..1119004 (-)	330	WP_016886161.1	hypothetical protein	-
ETK49_RS05765 (ETK49_05765)	-	1119205..1119981 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
ETK49_RS05770 (ETK49_05770)	rapC	1120108..1121226 (+)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
ETK49_RS22415	-	1121216..1121353 (+)	138	WP_016886158.1	hypothetical protein	-
ETK49_RS05775 (ETK49_05775)	-	1121358..1121636 (+)	279	WP_003180226.1	hypothetical protein	-
ETK49_RS05780 (ETK49_05780)	-	1121711..1121896 (-)	186	WP_003180228.1	YhzD family protein	-
ETK49_RS05785 (ETK49_05785)	-	1122014..1122910 (+)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
ETK49_RS05790 (ETK49_05790)	-	1122903..1124171 (+)	1269	WP_003180232.1	ABC transporter permease	-
ETK49_RS05795 (ETK49_05795)	-	1124291..1125517 (+)	1227	WP_009328954.1	DNA repair exonuclease	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=300032 ETK49_RS05770 WP_009328956.1 1120108..1121226(+) (rapC) [Bacillus licheniformis strain SRCM103608]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=300032 ETK49_RS05770 WP_009328956.1 1120108..1121226(+) (rapC) [Bacillus licheniformis strain SRCM103608]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374