Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ETA57_RS17920 Genome accession   NZ_CP035404
Coordinates   3404610..3405491 (-) Length   293 a.a.
NCBI ID   WP_021837675.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM103583     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3399610..3410491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA57_RS17885 (ETA57_17885) - 3399819..3400295 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  ETA57_RS17890 (ETA57_17890) - 3400295..3400579 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  ETA57_RS17895 (ETA57_17895) mnhG 3400563..3400937 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  ETA57_RS17900 (ETA57_17900) - 3400977..3401366 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  ETA57_RS17905 (ETA57_17905) comA 3401383..3402021 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  ETA57_RS17910 (ETA57_17910) comP 3402108..3404414 (-) 2307 WP_003184851.1 ATP-binding protein Regulator
  ETA57_RS17915 (ETA57_17915) comX 3404437..3404601 (-) 165 WP_003184853.1 competence pheromone ComX -
  ETA57_RS17920 (ETA57_17920) comQ 3404610..3405491 (-) 882 WP_021837675.1 polyprenyl synthetase family protein Regulator
  ETA57_RS17925 (ETA57_17925) degQ 3405680..3405820 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  ETA57_RS17935 (ETA57_17935) - 3406306..3406653 (+) 348 WP_231105863.1 SDR family oxidoreductase -
  ETA57_RS17940 (ETA57_17940) - 3406696..3407916 (-) 1221 WP_003184864.1 HDOD domain-containing protein -
  ETA57_RS17945 (ETA57_17945) - 3408095..3409564 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  ETA57_RS17950 (ETA57_17950) - 3409582..3410133 (-) 552 WP_003184868.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33390.10 Da        Isoelectric Point: 4.6179

>NTDB_id=299980 ETA57_RS17920 WP_021837675.1 3404610..3405491(-) (comQ) [Bacillus licheniformis strain SRCM103583]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINSSVAMNAATALYTISIKVIGSVSNDSCFFNKMMEYILQSSQGQHDDLSDKPVTENECLDMIKRKSGSLTALSCVLGT
MLATGKFNPTVESYALQLGIALQIENDYRGLFYNSKSDIVKNKRTLAYLYLKRKFNQSSIDLLKVFENEDKIADIEIKCY
KEKLKEAGVPQYMYVMIQLAIQKFRRGIAELELKQEEKKWLASFLLNKFDKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=299980 ETA57_RS17920 WP_021837675.1 3404610..3405491(-) (comQ) [Bacillus licheniformis strain SRCM103583]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACAGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
CGATTCTTGCTTTTTTAATAAAATGATGGAATACATATTGCAATCTTCACAAGGGCAACATGATGATCTTAGTGATAAGC
CGGTTACGGAAAACGAATGCCTTGATATGATCAAGCGCAAATCTGGTTCATTGACAGCTCTTTCATGTGTTTTGGGAACC
ATGCTCGCTACAGGTAAATTTAATCCTACTGTTGAATCTTATGCACTCCAATTGGGCATTGCTTTACAGATCGAAAATGA
TTATAGAGGTCTTTTCTATAATTCAAAAAGCGATATTGTGAAAAATAAGCGAACACTTGCTTATTTATACTTGAAAAGAA
AATTTAATCAATCCTCAATTGATTTATTAAAAGTATTTGAAAATGAGGATAAAATTGCCGATATAGAAATAAAATGTTAT
AAAGAAAAATTGAAGGAAGCTGGTGTTCCCCAATATATGTATGTCATGATTCAGCTTGCTATTCAGAAATTTAGAAGAGG
AATAGCTGAGTTAGAGCTGAAACAAGAGGAAAAGAAATGGCTTGCTTCTTTCCTTTTGAACAAGTTTGATAAGGAGGATT
AA

Domains


Predicted by InterProScan.

(41-230)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.291

98.635

0.437