Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   ETA57_RS17190 Genome accession   NZ_CP035404
Coordinates   3281187..3281660 (-) Length   157 a.a.
NCBI ID   WP_003184615.1    Uniprot ID   Q65FU5
Organism   Bacillus licheniformis strain SRCM103583     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3276187..3286660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA57_RS17150 (ETA57_17150) - 3276700..3277488 (+) 789 WP_003184598.1 ABC transporter ATP-binding protein -
  ETA57_RS17155 (ETA57_17155) - 3277451..3278275 (+) 825 WP_009329424.1 ABC transporter permease -
  ETA57_RS17160 (ETA57_17160) ytkD 3278306..3278782 (-) 477 WP_003184602.1 RNA deprotection pyrophosphohydrolase -
  ETA57_RS17165 (ETA57_17165) - 3278977..3279300 (-) 324 WP_003184604.1 hypothetical protein -
  ETA57_RS17170 (ETA57_17170) - 3279348..3279752 (-) 405 WP_003184607.1 phage holin family protein -
  ETA57_RS17175 (ETA57_17175) - 3279904..3280341 (-) 438 WP_003184609.1 Dps family protein -
  ETA57_RS17180 (ETA57_17180) ytzI 3280475..3280618 (+) 144 WP_003184611.1 YtzI protein -
  ETA57_RS17185 (ETA57_17185) - 3280612..3281055 (-) 444 WP_003184613.1 FixH family protein -
  ETA57_RS17190 (ETA57_17190) luxS 3281187..3281660 (-) 474 WP_003184615.1 S-ribosylhomocysteine lyase Regulator
  ETA57_RS17195 (ETA57_17195) yidD 3281798..3282025 (+) 228 WP_003184617.1 membrane protein insertion efficiency factor YidD -
  ETA57_RS17200 (ETA57_17200) - 3282022..3282591 (-) 570 WP_003184618.1 carbonic anhydrase -
  ETA57_RS17205 (ETA57_17205) - 3282718..3283899 (+) 1182 WP_003184620.1 GTP-binding protein -
  ETA57_RS17210 (ETA57_17210) - 3283998..3285038 (+) 1041 WP_069500720.1 zinc ABC transporter substrate-binding protein -
  ETA57_RS17215 (ETA57_17215) - 3285166..3286632 (+) 1467 WP_069500721.1 IS1182 family transposase -

Sequence

Protein


Download         Length: 157 a.a.        Molecular weight: 17885.47 Da        Isoelectric Point: 5.5531

>NTDB_id=299977 ETA57_RS17190 WP_003184615.1 3281187..3281660(-) (luxS) [Bacillus licheniformis strain SRCM103583]
MPSVESFELDHNAVKAPYVRHCGVHKVGTDGVVNKFDIRFCQPNKQAMKPDTIHTLEHLLAFTIRTYAEKYDHFDIIDIS
PMGCQTGYYLVVSGEPKVEEIVDLLEDTFKEAVEVTEIPAANEKQCGQAKLHDLEGAKRMMRFWLSQNKEDLLKVFG

Nucleotide


Download         Length: 474 bp        

>NTDB_id=299977 ETA57_RS17190 WP_003184615.1 3281187..3281660(-) (luxS) [Bacillus licheniformis strain SRCM103583]
ATGCCTTCAGTTGAAAGTTTTGAGCTTGACCATAATGCGGTAAAAGCGCCTTATGTCAGACACTGCGGCGTCCACAAAGT
GGGAACGGACGGCGTCGTCAACAAGTTTGACATCCGTTTTTGCCAGCCGAATAAACAGGCAATGAAACCTGATACGATTC
ATACTTTAGAGCACCTTCTTGCATTTACAATCCGCACATATGCGGAAAAATATGACCACTTTGATATTATCGACATTTCG
CCGATGGGCTGCCAAACGGGCTATTACCTGGTGGTAAGCGGTGAGCCGAAAGTGGAAGAAATCGTTGATTTGCTTGAGGA
TACGTTCAAAGAAGCCGTTGAAGTGACTGAAATTCCTGCGGCTAACGAAAAACAGTGCGGCCAGGCAAAGCTTCACGATC
TTGAAGGCGCAAAGCGCATGATGCGTTTTTGGCTTTCGCAAAATAAAGAAGACCTGCTCAAGGTGTTTGGGTAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-150)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65FU5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

35.802

100

0.369