Detailed information NTG0299954

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: ETA57_RS14050
• Genome accession: NZ_CP035404
• Coordinates: 2680029..2680466 (-)
• Length: 145 a.a.
• NCBI ID: WP_026699159.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SRCM103583
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2675029..2685466

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA57_RS14000 (ETA57_14000)	sinI	2675198..2675374 (+)	177	WP_003183444.1	anti-repressor SinI family protein	Regulator
ETA57_RS14005 (ETA57_14005)	sinR	2675408..2675743 (+)	336	WP_006637528.1	helix-turn-helix domain-containing protein	Regulator
ETA57_RS14010 (ETA57_14010)	-	2675848..2676642 (-)	795	WP_003183447.1	TasA family protein	-
ETA57_RS14015 (ETA57_14015)	-	2676716..2677300 (-)	585	WP_003183449.1	signal peptidase I	-
ETA57_RS14020 (ETA57_14020)	tapA	2677297..2678025 (-)	729	WP_003183451.1	amyloid fiber anchoring/assembly protein TapA	-
ETA57_RS14025 (ETA57_14025)	-	2678335..2678622 (+)	288	WP_223307118.1	YqzG/YhdC family protein	-
ETA57_RS14030 (ETA57_14030)	-	2678652..2678834 (-)	183	WP_003183456.1	YqzE family protein	-
ETA57_RS14035 (ETA57_14035)	comGG	2678923..2679288 (-)	366	WP_003183459.1	competence type IV pilus minor pilin ComGG	-
ETA57_RS14040 (ETA57_14040)	comGF	2679301..2679789 (-)	489	WP_011201694.1	competence type IV pilus minor pilin ComGF	-
ETA57_RS14045 (ETA57_14045)	comGE	2679698..2680045 (-)	348	WP_026699160.1	competence type IV pilus minor pilin ComGE	-
ETA57_RS14050 (ETA57_14050)	comGD	2680029..2680466 (-)	438	WP_026699159.1	competence type IV pilus minor pilin ComGD	Machinery gene
ETA57_RS14055 (ETA57_14055)	comGC	2680472..2680765 (-)	294	WP_003183466.1	competence type IV pilus major pilin ComGC	Machinery gene
ETA57_RS14060 (ETA57_14060)	comGB	2680779..2681813 (-)	1035	WP_026699158.1	competence type IV pilus assembly protein ComGB	Machinery gene
ETA57_RS14065 (ETA57_14065)	comGA	2681803..2682867 (-)	1065	WP_069500612.1	competence type IV pilus ATPase ComGA	Machinery gene
ETA57_RS14070 (ETA57_14070)	-	2683024..2683863 (-)	840	WP_003183480.1	STAS domain-containing protein	-
ETA57_RS14080 (ETA57_14080)	-	2684105..2684482 (-)	378	WP_003183482.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
ETA57_RS14085 (ETA57_14085)	-	2684691..2684936 (+)	246	WP_003183483.1	DUF2626 domain-containing protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16275.10 Da
• Isoelectric Point: 9.6134

>NTDB_id=299954 ETA57_RS14050 WP_026699159.1 2680029..2680466(-) (comGD) [Bacillus licheniformis strain SRCM103583]
MNQKGFTLLESLTVLMIGSIMFSLLFALLPPIYEKRIVQHFVSQLEEDLLYAQQTALVRHTTVKVQFDFAGCRYIMKYSD
EGSSPELVRTYSCNIAIKKSTLKPILTFNPSGVPNQGGKIVIDTQHASFILTIYLGSGKINVQKK

Nucleotide

• Length: 438 bp

>NTDB_id=299954 ETA57_RS14050 WP_026699159.1 2680029..2680466(-) (comGD) [Bacillus licheniformis strain SRCM103583]
ATGAATCAAAAAGGATTTACGCTTTTGGAAAGTTTAACTGTATTGATGATCGGTTCTATTATGTTCTCTCTTCTCTTTGC
TCTACTGCCTCCCATTTATGAAAAAAGAATCGTTCAGCACTTTGTCTCACAGCTTGAAGAGGATTTGCTTTACGCTCAGC
AGACGGCTCTCGTCCGCCATACGACGGTTAAGGTGCAGTTTGACTTTGCCGGCTGCCGCTATATCATGAAGTATTCGGAC
GAAGGCTCATCGCCTGAACTGGTCAGGACATACAGCTGCAATATCGCAATCAAAAAGTCGACGCTCAAACCAATTCTTAC
TTTTAATCCAAGCGGTGTTCCGAATCAAGGGGGAAAGATCGTGATCGATACACAGCATGCCTCTTTTATACTGACGATCT
ATTTAGGAAGCGGAAAGATTAATGTTCAAAAAAAATAA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (2-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	39.86	98.621	0.393