Detailed information NTG0299948

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ETA57_RS13245
• Genome accession: NZ_CP035404
• Coordinates: 2538139..2539269 (-)
• Length: 376 a.a.
• NCBI ID: WP_026699173.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SRCM103583
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2533139..2544269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA57_RS13225 (ETA57_13225)	-	2534328..2534672 (-)	345	WP_003183123.1	hypothetical protein	-
ETA57_RS13230 (ETA57_13230)	-	2534935..2537121 (-)	2187	WP_069500591.1	RNA ligase	-
ETA57_RS13235 (ETA57_13235)	-	2537248..2537685 (-)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
ETA57_RS13240 (ETA57_13240)	-	2537844..2538149 (-)	306	WP_003183128.1	hypothetical protein	-
ETA57_RS13245 (ETA57_13245)	rapC	2538139..2539269 (-)	1131	WP_026699173.1	Rap family tetratricopeptide repeat protein	Regulator
ETA57_RS13250 (ETA57_13250)	-	2539500..2539937 (-)	438	WP_003183133.1	peptidylprolyl isomerase	-
ETA57_RS13255 (ETA57_13255)	-	2540274..2541170 (+)	897	WP_011198086.1	DUF1002 domain-containing protein	-
ETA57_RS13260 (ETA57_13260)	-	2541153..2542028 (-)	876	WP_051627645.1	poly-gamma-glutamate hydrolase family protein	-
ETA57_RS13265 (ETA57_13265)	lysA	2542267..2543586 (-)	1320	WP_003183141.1	diaminopimelate decarboxylase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44216.02 Da
• Isoelectric Point: 4.6813

>NTDB_id=299948 ETA57_RS13245 WP_026699173.1 2538139..2539269(-) (rapC) [Bacillus licheniformis strain SRCM103583]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALADFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=299948 ETA57_RS13245 WP_026699173.1 2538139..2539269(-) (rapC) [Bacillus licheniformis strain SRCM103583]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCAGATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (190-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.48	100	0.476
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452