Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ETA57_RS10980 Genome accession   NZ_CP035404
Coordinates   2099531..2101534 (+) Length   667 a.a.
NCBI ID   WP_069500519.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM103583     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2094531..2106534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA57_RS10945 (ETA57_10945) - 2094669..2095430 (+) 762 WP_069500517.1 hypothetical protein -
  ETA57_RS10950 (ETA57_10950) - 2095490..2096329 (+) 840 WP_003182218.1 thymidylate synthase -
  ETA57_RS10955 (ETA57_10955) nucA/comI 2096688..2097116 (+) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ETA57_RS10960 (ETA57_10960) dinR/lexA 2097312..2097935 (-) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  ETA57_RS10965 (ETA57_10965) yneA 2098088..2098399 (+) 312 WP_003182225.1 cell division suppressor protein YneA -
  ETA57_RS10970 (ETA57_10970) - 2098418..2099065 (+) 648 WP_003182227.1 recombinase family protein -
  ETA57_RS10975 (ETA57_10975) - 2099131..2099364 (+) 234 WP_003182231.1 DUF896 domain-containing protein -
  ETA57_RS10980 (ETA57_10980) recP/tkt 2099531..2101534 (+) 2004 WP_069500519.1 transketolase Machinery gene
  ETA57_RS10985 (ETA57_10985) sirA 2101689..2102126 (+) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  ETA57_RS10990 (ETA57_10990) - 2102211..2102429 (+) 219 WP_003182236.1 YneF family protein -
  ETA57_RS10995 (ETA57_10995) - 2102510..2102671 (-) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -
  ETA57_RS11000 (ETA57_11000) - 2102914..2103621 (+) 708 WP_003182240.1 cytochrome c biogenesis protein CcdA -
  ETA57_RS11005 (ETA57_11005) pilH 2103703..2104074 (+) 372 WP_016885441.1 response regulator Machinery gene
  ETA57_RS11010 (ETA57_11010) - 2104148..2104642 (+) 495 WP_085959522.1 cytochrome c biogenesis protein CcdC -
  ETA57_RS11015 (ETA57_11015) - 2104678..2105106 (-) 429 WP_003182245.1 DUF2621 domain-containing protein -
  ETA57_RS11020 (ETA57_11020) - 2105311..2105718 (-) 408 WP_003182248.1 Hsp20/alpha crystallin family protein -
  ETA57_RS11025 (ETA57_11025) - 2105854..2106000 (-) 147 WP_003182250.1 small acid-soluble spore protein P -
  ETA57_RS11030 (ETA57_11030) sspO 2106042..2106188 (-) 147 WP_003182252.1 small acid-soluble spore protein O -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72564.72 Da        Isoelectric Point: 4.8701

>NTDB_id=299938 ETA57_RS10980 WP_069500519.1 2099531..2101534(+) (recP/tkt) [Bacillus licheniformis strain SRCM103583]
MKTIELKSVATIRTLSIDAIEKAKSGHPGMPMGTAPMAYALWTKMMNVSPENPNWFNRDRFVLSAGHGSMLLYSMLHLSG
YDVSIEDLKNFRQWGSKTPGHPEFGHTPGVDATTGPLGQGIGMAVGMALAERHLAETYNRDDYRVVDHYTYSICGDGDLM
EGISSEAASLAGHLNLGRLIVLYDSNDISLDGELNRSFSENVKQRFEAMNWEVLYVEDGNNIAEITAAIEKAKQNEKQPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGSEEAKLTKGAYEWTYEEDFYVPSEVYEHFNETVKEAGKKKEAEWNELFSAYKK
AHPELAEELELAIKGELPEGWDQKVPVYEKGSSLASRASSGEVLNGIAQQVPFFFGGSADLAGSNKTTIKNGGDVSAKDY
AGRNIWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKLALQSKDQPTALVLTRQNLPTIDQSAETAYEGVKKGAYVVSKSQNEKPEAILLASG
SEVGLALDAQSELQKEGIDVSVVSVPSWDRFDKQPAEYKNAVLPTDVTKRLAIEMGSPLGWERYTGTDGDILGIDQFGAS
APGETIMKEYGFTPANVVDRVKKLLNR

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=299938 ETA57_RS10980 WP_069500519.1 2099531..2101534(+) (recP/tkt) [Bacillus licheniformis strain SRCM103583]
ATGAAAACGATTGAATTAAAATCTGTCGCAACAATACGAACACTCTCCATAGACGCGATTGAAAAAGCTAAATCCGGTCA
CCCCGGCATGCCGATGGGGACTGCTCCGATGGCTTATGCGCTTTGGACAAAAATGATGAATGTCAGCCCTGAAAATCCGA
ATTGGTTTAACAGGGACCGTTTTGTGCTTTCCGCCGGACACGGATCAATGCTTTTGTACAGCATGCTTCACTTAAGCGGA
TATGACGTTTCAATTGAAGACCTCAAAAATTTCCGCCAATGGGGAAGCAAAACTCCTGGGCATCCGGAATTCGGACATAC
TCCGGGTGTAGATGCGACTACAGGTCCGCTTGGCCAAGGAATCGGAATGGCTGTCGGAATGGCGCTTGCTGAACGTCACC
TTGCTGAAACTTACAACCGTGACGACTATCGCGTCGTTGACCATTATACATACAGCATTTGCGGTGACGGAGACTTGATG
GAGGGAATTTCATCCGAAGCGGCTTCGCTTGCGGGACATTTGAACCTCGGCCGTCTCATCGTGCTTTATGATTCAAATGA
CATTTCGCTTGACGGCGAACTAAACCGCTCATTCTCTGAAAATGTAAAGCAGCGCTTTGAAGCGATGAATTGGGAAGTGC
TTTATGTTGAAGACGGCAACAACATTGCCGAAATTACGGCGGCCATCGAGAAAGCGAAACAAAATGAAAAGCAGCCGACA
TTAATTGAAGTGAAAACAACGATCGGTTTCGGTTCTCCAAACCGTGCGGGCACATCCGGCGTCCACGGCGCTCCGCTCGG
ATCAGAAGAGGCGAAATTAACGAAGGGAGCGTATGAGTGGACATACGAAGAAGATTTTTATGTTCCTTCCGAAGTGTACG
AGCACTTTAACGAAACAGTGAAGGAAGCGGGTAAGAAAAAAGAGGCGGAATGGAACGAACTGTTCTCCGCATACAAGAAA
GCCCACCCGGAACTTGCCGAAGAGCTTGAACTGGCGATCAAAGGCGAGCTTCCTGAAGGATGGGATCAGAAAGTACCTGT
ATATGAAAAAGGAAGCAGCCTTGCTTCACGTGCATCCTCAGGTGAAGTGTTAAACGGAATCGCTCAACAAGTGCCGTTTT
TCTTTGGCGGATCCGCGGACTTGGCCGGTTCCAACAAAACGACAATCAAAAACGGCGGAGATGTTTCAGCGAAGGATTAC
GCCGGCAGAAATATCTGGTTCGGTGTAAGGGAATTTGCGATGGGAGCAGCTTTGAACGGAATGGCTCTTCACGGAGGCCT
CCGCGTATTCGGCGGAACGTTCTTCGTTTTCTCCGATTACTTGAGACCAGCGATTCGTCTTGCTGCATTGATGGGGCTTC
CTGTCACCTATGTATTTACACATGACAGCATTGCCGTCGGTGAAGACGGACCGACTCATGAGCCGATTGAACAGCTGGCA
TCACTTCGTGCGCTGCCGAACTTGTCCGTCATCAGACCTGCCGACGGAAATGAAACAGCAGCTGCCTGGAAGCTCGCGCT
TCAATCAAAAGACCAGCCGACTGCGCTTGTGTTGACACGCCAAAACTTGCCGACAATCGATCAGTCTGCTGAAACGGCTT
ATGAAGGCGTTAAAAAGGGTGCATATGTCGTTTCAAAAAGCCAAAACGAAAAACCGGAAGCGATCTTGCTTGCGAGCGGA
TCTGAAGTTGGCCTTGCGCTTGATGCACAAAGCGAGCTGCAAAAAGAAGGCATTGACGTATCCGTTGTCAGCGTTCCGTC
ATGGGATCGATTTGACAAGCAGCCGGCTGAATATAAAAACGCTGTTCTTCCAACTGATGTGACAAAGCGTCTCGCAATTG
AAATGGGATCGCCGCTCGGATGGGAGAGATATACAGGCACTGACGGGGACATTCTCGGAATCGACCAGTTCGGTGCATCA
GCTCCTGGCGAAACGATCATGAAAGAATACGGTTTTACGCCTGCGAATGTAGTTGACCGGGTGAAAAAACTGTTAAATCG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

57.768

99.4

0.574