Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   ETA15_RS06865 Genome accession   NZ_CP035403
Coordinates   1305681..1307510 (+) Length   609 a.a.
NCBI ID   WP_171518460.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103581     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1300681..1312510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA15_RS06830 (ETA15_06830) yjbC 1301142..1301719 (+) 578 Protein_1284 GNAT family N-acetyltransferase -
  ETA15_RS06835 (ETA15_06835) spx 1301900..1302295 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ETA15_RS06840 (ETA15_06840) yjbE 1302550..1303206 (-) 657 WP_003232944.1 TerC family protein -
  ETA15_RS06845 (ETA15_06845) - 1303376..1303516 (+) 141 WP_119122854.1 hypothetical protein -
  ETA15_RS06850 (ETA15_06850) mecA 1303483..1304139 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  ETA15_RS06855 (ETA15_06855) - 1304134..1304256 (-) 123 WP_003245684.1 hypothetical protein -
  ETA15_RS06860 (ETA15_06860) coiA 1304300..1305451 (+) 1152 WP_017695683.1 competence protein CoiA Machinery gene
  ETA15_RS06865 (ETA15_06865) pepF 1305681..1307510 (+) 1830 WP_171518460.1 oligoendopeptidase F Regulator
  ETA15_RS06870 (ETA15_06870) - 1307548..1307715 (-) 168 WP_003244944.1 hypothetical protein -
  ETA15_RS06880 (ETA15_06880) spxH 1308029..1308928 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  ETA15_RS06885 (ETA15_06885) bhbI 1308925..1309323 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ETA15_RS06890 (ETA15_06890) cwlQ 1309575..1310309 (-) 735 WP_041351533.1 bifunctional muramidase/murein lytic transglycosylase -
  ETA15_RS06895 (ETA15_06895) yjbK 1310324..1310896 (-) 573 WP_015252351.1 CYTH domain-containing protein -
  ETA15_RS06900 (ETA15_06900) - 1311021..1311389 (+) 369 WP_003232922.1 hypothetical protein -
  ETA15_RS06905 (ETA15_06905) yjbM 1311418..1312053 (+) 636 WP_003245294.1 GTP diphosphokinase -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 70027.91 Da        Isoelectric Point: 5.2169

>NTDB_id=299766 ETA15_RS06865 WP_171518460.1 1305681..1307510(+) (pepF) [Bacillus subtilis strain SRCM103581]
MAEEKKANQLPDRSEVKAEDTWRLEDIFPSDEAWNKEFQAVKALIPNLSKYKGKLADSADHLYEALTYQDKVMERLGRLY
TYAHMRSDQDTGNSFYQGLNDKAGNLYTQAASATAYLVPEILSIEEDKLQQFILEKEELKLYSHAIEEITKERPHVLSEK
EEALLAEASEVLGSSSNTFSVLNNADITFPSIKDEDGNEKQITHGNFINFLESENREVRKNAFDAVYKTYGQYKNTMATT
LSGTVKKDNFYARVKKYKSAREAALSNNSIPEEVYDNLVKTINKHLPLLHRYIALRKKVLELDEVHIYDLYTPLVKDAGM
KVTYEEAKDYMLKGLAPLGEEYASILKEGLENRWVDVYENKGKRNGAYSSGAYGTNPYILMNWHNNVNNLFTLVHEFGHS
VHSYYTRKHQPYPYGNYSIFVAEVASTTNEALLGEYLLNNLEDEKQRLYILNHMLEGFRGTVFRQTMFAEFEHLIHTKAQ
EGEPLTPELLTNVYYDLNKKYFGDGMVIDKEIGLEWSRIPHFYYNYYVYQYATGYSAAQALSSQILKEGKPAVDRYIDFL
KAGSSQYPIDVLKKAGVDMTSPEPIEAACKMFEEKLDEMEELLMKVKQS

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=299766 ETA15_RS06865 WP_171518460.1 1305681..1307510(+) (pepF) [Bacillus subtilis strain SRCM103581]
ATGGCTGAGGAAAAAAAAGCAAACCAACTGCCTGACAGAAGTGAGGTAAAGGCAGAAGACACATGGAGACTTGAGGATAT
TTTTCCTAGTGATGAGGCCTGGAATAAAGAATTTCAAGCTGTAAAAGCATTAATTCCGAATTTATCTAAGTATAAAGGAA
AGCTGGCAGATTCAGCTGATCATTTATACGAGGCTCTTACGTATCAAGATAAAGTGATGGAGCGGCTGGGTAGGCTGTAC
ACATATGCGCATATGCGCTCTGACCAGGATACGGGGAACTCCTTTTACCAGGGGCTGAATGACAAGGCGGGAAACCTGTA
TACACAGGCCGCAAGCGCGACAGCTTATTTGGTTCCGGAGATTTTATCCATAGAAGAAGACAAACTGCAGCAGTTCATTC
TTGAAAAAGAAGAATTGAAGCTGTACTCTCATGCGATTGAGGAGATTACAAAGGAACGTCCGCATGTGCTGAGCGAGAAG
GAAGAGGCACTGCTTGCTGAAGCCTCCGAGGTACTGGGGTCATCTTCAAATACATTCAGTGTGTTAAATAACGCAGATAT
AACGTTTCCATCCATTAAAGACGAAGATGGGAATGAAAAACAGATCACTCACGGCAACTTTATTAATTTCTTGGAAAGTG
AAAACCGTGAAGTCCGCAAAAATGCGTTTGACGCAGTGTATAAAACGTACGGACAATATAAAAACACAATGGCCACGACG
CTAAGCGGCACTGTGAAAAAGGACAACTTCTACGCGAGAGTGAAAAAGTACAAGTCCGCGCGTGAGGCTGCGCTTTCTAA
CAACAGTATTCCTGAGGAAGTATACGATAACCTTGTTAAGACGATTAATAAGCATTTGCCGCTCCTGCACCGCTATATTG
CGCTAAGAAAGAAAGTGCTTGAGCTTGATGAAGTGCATATCTATGACCTGTATACACCGCTTGTGAAAGATGCTGGGATG
AAGGTGACATACGAGGAAGCCAAAGATTACATGCTGAAAGGCCTCGCACCATTAGGGGAAGAATATGCCTCTATCCTAAA
AGAAGGCCTGGAAAACCGCTGGGTGGACGTTTACGAAAATAAAGGCAAACGCAATGGGGCTTATTCATCAGGAGCTTACG
GCACGAATCCGTATATTTTGATGAACTGGCATAATAACGTGAATAATCTCTTTACGCTCGTGCACGAGTTTGGACATTCC
GTACACAGCTACTATACGAGAAAGCACCAGCCTTATCCATACGGCAATTACAGCATCTTTGTCGCGGAAGTTGCCTCTAC
GACAAATGAAGCGCTCCTTGGCGAATATTTGCTGAACAATTTAGAGGATGAAAAACAGCGCTTATATATTCTCAACCATA
TGCTTGAGGGCTTCAGGGGAACGGTCTTCAGACAAACGATGTTCGCTGAATTTGAACATCTGATCCATACAAAGGCTCAA
GAAGGCGAGCCGCTTACACCTGAGCTTCTGACAAATGTCTATTACGACCTGAATAAAAAGTATTTTGGAGACGGCATGGT
GATTGATAAGGAAATCGGCCTTGAATGGTCGCGTATTCCGCACTTCTATTACAATTACTATGTGTATCAGTATGCGACAG
GGTACAGCGCTGCCCAAGCATTAAGCAGCCAGATTTTGAAGGAAGGAAAGCCGGCGGTTGACCGTTATATTGACTTCCTG
AAAGCGGGAAGCTCACAATACCCGATTGATGTCCTGAAAAAAGCGGGTGTTGATATGACGTCTCCAGAGCCAATCGAAGC
CGCGTGCAAAATGTTTGAAGAAAAACTTGATGAAATGGAAGAGCTGCTGATGAAAGTCAAGCAGTCTTAA

Domains

Predicted by InterProScan.

Peptidase family M3 (Peptidase_M3)

(211-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

48.822

97.537

0.476

Multiple sequence alignment