Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ES969_RS18300 Genome accession   NZ_CP035402
Coordinates   3382965..3383678 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103576     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3377965..3388678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES969_RS18280 (ES969_18280) ghrB 3378110..3379087 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  ES969_RS18285 (ES969_18285) psdB 3379124..3381064 (-) 1941 WP_069837800.1 lantibiotic ABC transporter permease PsdB -
  ES969_RS18290 (ES969_18290) psdA 3381039..3381818 (-) 780 WP_069837801.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ES969_RS18295 (ES969_18295) psdS 3381901..3382971 (-) 1071 WP_121549133.1 two-component sensor histidine kinase PsdS -
  ES969_RS18300 (ES969_18300) braR 3382965..3383678 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  ES969_RS18305 (ES969_18305) - 3383825..3384033 (+) 209 Protein_3524 hypothetical protein -
  ES969_RS18310 (ES969_18310) yvcN 3384069..3384833 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  ES969_RS18315 (ES969_18315) crh 3384834..3385091 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ES969_RS18320 (ES969_18320) whiA 3385115..3386065 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  ES969_RS18325 (ES969_18325) mgfK 3386088..3387041 (-) 954 WP_069837939.1 gluconeogenesis morphogenetic factor -
  ES969_RS18330 (ES969_18330) rapZ 3387043..3387930 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ES969_RS18335 (ES969_18335) rppI 3387955..3388431 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=299697 ES969_RS18300 WP_014481000.1 3382965..3383678(-) (braR) [Bacillus subtilis strain SRCM103576]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=299697 ES969_RS18300 WP_014481000.1 3382965..3383678(-) (braR) [Bacillus subtilis strain SRCM103576]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435

Multiple sequence alignment