Detailed information NTG0299669

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ES969_RS13540
• Genome accession: NZ_CP035402
• Coordinates: 2481809..2482936 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103576
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2476809..2487936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES969_RS21955	-	2476856..2477068 (-)	213	Protein_2601	recombinase family protein	-
ES969_RS13520 (ES969_13520)	fumC	2477287..2478675 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
ES969_RS13525 (ES969_13525)	-	2478842..2479732 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
ES969_RS13530 (ES969_13530)	-	2480674..2481069 (+)	396	WP_046160622.1	VOC family protein	-
ES969_RS13540 (ES969_13540)	rapC	2481809..2482936 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
ES969_RS22125 (ES969_13545)	-	2483118..2485044 (+)	1927	Protein_2606	T7SS effector LXG polymorphic toxin	-
ES969_RS13550 (ES969_13550)	-	2485058..2485345 (+)	288	WP_014480331.1	hypothetical protein	-
ES969_RS13560 (ES969_13560)	-	2485748..2486188 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
ES969_RS13565 (ES969_13565)	-	2486287..2486739 (+)	453	WP_129134003.1	SMI1/KNR4 family protein	-
ES969_RS13570 (ES969_13570)	cdiI	2486836..2487195 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
ES969_RS13575 (ES969_13575)	-	2487300..2487779 (+)	480	WP_224588637.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=299669 ES969_RS13540 WP_014480328.1 2481809..2482936(-) (rapC) [Bacillus subtilis strain SRCM103576]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=299669 ES969_RS13540 WP_014480328.1 2481809..2482936(-) (rapC) [Bacillus subtilis strain SRCM103576]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397