Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ES969_RS09970 Genome accession   NZ_CP035402
Coordinates   1867077..1869080 (+) Length   667 a.a.
NCBI ID   WP_014476936.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103576     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1862077..1874080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES969_RS09930 (ES969_09930) pghL 1862442..1863200 (+) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  ES969_RS09935 (ES969_09935) - 1863227..1863676 (-) 450 WP_014479935.1 YndM family protein -
  ES969_RS09940 (ES969_09940) fosM 1863885..1864304 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  ES969_RS21910 - 1864228..1864567 (+) 340 Protein_1899 hypothetical protein -
  ES969_RS09950 (ES969_09950) dinR/lexA 1864854..1865471 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ES969_RS09955 (ES969_09955) yneA 1865622..1865939 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ES969_RS09960 (ES969_09960) dinL 1865958..1866611 (+) 654 WP_014479938.1 recombinase family protein -
  ES969_RS09965 (ES969_09965) ynzC 1866675..1866908 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ES969_RS09970 (ES969_09970) recP/tkt 1867077..1869080 (+) 2004 WP_014476936.1 transketolase Machinery gene
  ES969_RS09975 (ES969_09975) sirA 1869233..1869679 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ES969_RS09980 (ES969_09980) yneF 1869765..1869983 (+) 219 WP_003221221.1 YneF family protein -
  ES969_RS09985 (ES969_09985) ynzD 1870057..1870230 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  ES969_RS09990 (ES969_09990) ccdA 1870450..1871157 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  ES969_RS09995 (ES969_09995) yneI 1871246..1871608 (+) 363 WP_003245707.1 response regulator -
  ES969_RS10000 (ES969_10000) yneJ 1871687..1872178 (+) 492 WP_010886519.1 CcdC family protein -
  ES969_RS10005 (ES969_10005) yneK 1872209..1872637 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  ES969_RS10010 (ES969_10010) cotM 1872871..1873263 (-) 393 WP_072592538.1 outer spore coat protein CotM -
  ES969_RS10015 (ES969_10015) sspP 1873344..1873490 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  ES969_RS10020 (ES969_10020) sspO 1873522..1873668 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=299645 ES969_RS09970 WP_014476936.1 1867077..1869080(+) (recP/tkt) [Bacillus subtilis strain SRCM103576]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=299645 ES969_RS09970 WP_014476936.1 1867077..1869080(+) (recP/tkt) [Bacillus subtilis strain SRCM103576]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562