Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ETA19_RS18165 Genome accession   NZ_CP035401
Coordinates   3473583..3474296 (-) Length   237 a.a.
NCBI ID   WP_128993449.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103837     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3468583..3479296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA19_RS18145 (ETA19_18145) ghrB 3468728..3469705 (+) 978 WP_080332215.1 D-glycerate dehydrogenase -
  ETA19_RS18150 (ETA19_18150) psdB 3469742..3471682 (-) 1941 WP_128993447.1 lantibiotic ABC transporter permease PsdB -
  ETA19_RS18155 (ETA19_18155) psdA 3471657..3472436 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ETA19_RS18160 (ETA19_18160) psdS 3472519..3473589 (-) 1071 WP_128993448.1 two-component sensor histidine kinase PsdS -
  ETA19_RS18165 (ETA19_18165) braR 3473583..3474296 (-) 714 WP_128993449.1 two-component system response regulator PsdR Regulator
  ETA19_RS18170 (ETA19_18170) - 3474443..3474652 (+) 210 WP_029318346.1 hypothetical protein -
  ETA19_RS18175 (ETA19_18175) yvcN 3474688..3475452 (-) 765 WP_128993450.1 arylamine N-acetyltransferase -
  ETA19_RS18180 (ETA19_18180) crh 3475453..3475710 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ETA19_RS18185 (ETA19_18185) whiA 3475734..3476684 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  ETA19_RS18190 (ETA19_18190) mgfK 3476707..3477660 (-) 954 WP_075746863.1 gluconeogenesis morphogenetic factor -
  ETA19_RS18195 (ETA19_18195) rapZ 3477662..3478549 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ETA19_RS18200 (ETA19_18200) rppI 3478574..3479050 (-) 477 WP_128993451.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27500.36 Da        Isoelectric Point: 4.6062

>NTDB_id=299546 ETA19_RS18165 WP_128993449.1 3473583..3474296(-) (braR) [Bacillus subtilis strain SRCM103837]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLSIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=299546 ETA19_RS18165 WP_128993449.1 3473583..3474296(-) (braR) [Bacillus subtilis strain SRCM103837]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAACCGTTCCATTTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTATCGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTTAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.089

94.515

0.426