Detailed information NTG0299443

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ETA19_RS03765
• Genome accession: NZ_CP035401
• Coordinates: 729102..730229 (-)
• Length: 375 a.a.
• NCBI ID: WP_128992497.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103837
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 724102..735229

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA19_RS03745 (ETA19_03745)	-	724175..724495 (-)	321	WP_128993639.1	recombinase family protein	-
ETA19_RS03750 (ETA19_03750)	-	725027..725236 (-)	210	WP_014479083.1	hypothetical protein	-
ETA19_RS03755 (ETA19_03755)	-	725469..728486 (+)	3018	WP_128992496.1	SIR2 family protein	-
ETA19_RS03760 (ETA19_03760)	-	728915..729112 (-)	198	WP_014479085.1	hypothetical protein	-
ETA19_RS03765 (ETA19_03765)	rapC	729102..730229 (-)	1128	WP_128992497.1	Rap family tetratricopeptide repeat protein	Regulator
ETA19_RS03770 (ETA19_03770)	-	730419..730724 (-)	306	WP_128992498.1	hypothetical protein	-
ETA19_RS03775 (ETA19_03775)	yezA	730791..730997 (-)	207	WP_003233877.1	bacteriocin immunity protein	-
ETA19_RS03780 (ETA19_03780)	atxF	731237..731692 (-)	456	WP_128993640.1	TIGR01741 family protein	-
ETA19_RS03785 (ETA19_03785)	yeeF	731712..733721 (-)	2010	WP_128992499.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-
ETA19_RS03790 (ETA19_03790)	-	733888..734226 (+)	339	WP_128992500.1	hypothetical protein	-
ETA19_RS03795 (ETA19_03795)	-	734239..735159 (+)	921	WP_128992501.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44327.05 Da
• Isoelectric Point: 6.9584

>NTDB_id=299443 ETA19_RS03765 WP_128992497.1 729102..730229(-) (rapC) [Bacillus subtilis strain SRCM103837]
MGTISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDVMEEDQDLLIYYQLIAFRHQLMIDYVIPSEGNQMKLSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEQSILQFKKSNFNNLTQAYHDLALIYFLQHKQDQAMDCFRKGVRFACKFGDDLFKIMFEGLQALFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=299443 ETA19_RS03765 WP_128992497.1 729102..730229(-) (rapC) [Bacillus subtilis strain SRCM103837]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAAATGCTTAAAGCTGAGATTGAGCGGGACATTGACGTCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCATCTGAAGGAAACCAAATGAAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAATACAATTCCTTATATTTCAGATGAAATCG
AGCGGGCAGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCATGTATCCATGCACTATTCTTCT
CAGGCGTATAACATTTATAAAACGCACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGAAACTA
CGATGACCTAGAAAGTCATGAAAAGGCGCTCCCTCACCTCGAACAGGCACTAAAAGGCGCACGGCTGCTTGAAAGCAAAA
ACAAGCGAATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGCGAATTGACGAAAGCAGCAAAA
TACATGGAGCAATCGATACTCCAATTCAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGACCAAGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGGCGATG
ACCTATTTAAAATTATGTTTGAAGGATTGCAGGCGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGGTATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (221-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.425	100	0.419
rapF	Bacillus subtilis subsp. subtilis str. 168	39.314	100	0.397