Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB432_RS29255 Genome accession   NZ_CP030117
Coordinates   6169861..6170814 (-) Length   317 a.a.
NCBI ID   WP_048035294.1    Uniprot ID   A0A2Z4MQR8
Organism   Brevibacillus brevis strain DZQ7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 6164861..6175814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB432_RS29230 (AB432_029230) - 6165267..6166130 (+) 864 WP_048035289.1 ABC transporter ATP-binding protein -
  AB432_RS29235 (AB432_029235) - 6166335..6166991 (+) 657 WP_048035290.1 DJ-1/PfpI family protein -
  AB432_RS29240 (AB432_029240) - 6167076..6168062 (-) 987 WP_048035291.1 siderophore ABC transporter substrate-binding protein -
  AB432_RS29245 (AB432_029245) - 6168168..6168926 (-) 759 WP_048035292.1 ABC transporter ATP-binding protein -
  AB432_RS29250 (AB432_029250) - 6168923..6169864 (-) 942 WP_048035293.1 iron chelate uptake ABC transporter family permease subunit -
  AB432_RS29255 (AB432_029255) ceuB 6169861..6170814 (-) 954 WP_048035294.1 ABC transporter permease Machinery gene
  AB432_RS29260 (AB432_029260) - 6171064..6171828 (-) 765 WP_048035295.1 DUF4097 family beta strand repeat-containing protein -
  AB432_RS29265 (AB432_029265) - 6172028..6172702 (+) 675 WP_048035296.1 Crp/Fnr family transcriptional regulator -
  AB432_RS29270 (AB432_029270) - 6172882..6173238 (+) 357 WP_007724662.1 response regulator -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35006.33 Da        Isoelectric Point: 9.8595

>NTDB_id=299401 AB432_RS29255 WP_048035294.1 6169861..6170814(-) (ceuB) [Brevibacillus brevis strain DZQ7]
MKKRYLVVALILLSFVSLFIGVINISPRDLFNLTDDKVQVMLISRIPRLISIIIAGMSMSIVGLIMQQLTRNKFVSPTTA
GTEDSVRFGILISLLVFVDAGPWVKLLVAFAFALLGTFIFMKILDKIKFKDSIFIPLVGLMFGNIVGSITTFFAYKHDLM
QNMSAWLHGDFSTIMKGNYELLYISIPLVIIAYLYANKFTIAGMGEEFAINLGLNYKQVVNIGLIIVASVTSVVILTVGA
IPFLGLIIPNLVTLYLGDNLKKSLGHTALLGAVFVLACDILGRLIIYPYEISIGLMVGVIGSAIFVYLLMRRKAYEQ

Nucleotide


Download         Length: 954 bp        

>NTDB_id=299401 AB432_RS29255 WP_048035294.1 6169861..6170814(-) (ceuB) [Brevibacillus brevis strain DZQ7]
ATGAAAAAGAGATATTTGGTTGTAGCACTTATTTTGCTATCGTTCGTTTCACTTTTTATTGGTGTGATAAATATATCTCC
AAGGGACCTGTTCAATCTCACGGATGACAAGGTACAAGTCATGTTGATCAGCCGGATTCCGCGACTCATCAGTATCATTA
TCGCGGGGATGAGCATGAGTATCGTTGGCCTGATCATGCAGCAGTTGACGCGGAACAAGTTCGTTTCGCCAACGACAGCG
GGGACAGAGGATTCCGTTCGATTCGGAATTTTGATTTCCCTTTTGGTATTCGTCGATGCTGGTCCTTGGGTCAAGCTGCT
CGTCGCTTTTGCTTTCGCCTTGCTTGGAACATTTATCTTTATGAAGATTCTCGACAAAATCAAGTTCAAGGACTCCATTT
TCATTCCGCTAGTGGGCTTGATGTTTGGAAATATCGTCGGTTCGATTACGACGTTTTTCGCTTATAAGCACGACCTGATG
CAAAATATGTCTGCCTGGCTGCATGGAGATTTCTCCACGATTATGAAAGGCAACTACGAGCTGTTGTACATAAGCATTCC
GCTGGTGATTATCGCCTACTTGTATGCGAACAAGTTCACGATTGCAGGAATGGGTGAAGAGTTCGCCATTAACCTCGGGC
TGAACTACAAGCAGGTCGTCAATATCGGCCTGATCATCGTCGCGAGTGTTACTTCGGTTGTTATTCTCACGGTAGGGGCG
ATCCCGTTTTTGGGACTGATCATTCCCAATCTGGTTACGTTGTACCTGGGGGATAACCTGAAGAAAAGCTTGGGTCATAC
CGCTTTGCTTGGTGCGGTTTTTGTACTCGCTTGTGATATCCTGGGACGCCTTATCATCTATCCATACGAGATTTCCATCG
GCTTGATGGTTGGGGTCATAGGCAGCGCGATCTTCGTGTACTTACTCATGAGAAGAAAGGCATATGAACAATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z4MQR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

56.55

98.738

0.558

Multiple sequence alignment