Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | AB432_RS10275 | Genome accession | NZ_CP030117 |
| Coordinates | 2030853..2031281 (-) | Length | 142 a.a. |
| NCBI ID | WP_048032199.1 | Uniprot ID | - |
| Organism | Brevibacillus brevis strain DZQ7 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 2006896..2032817 | 2030853..2031281 | within | 0 |
Gene organization within MGE regions
Location: 2006896..2032817
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB432_RS10100 (AB432_010100) | - | 2006896..2007204 (-) | 309 | WP_048032176.1 | hypothetical protein | - |
| AB432_RS10115 (AB432_010115) | - | 2008151..2008582 (+) | 432 | WP_048032179.1 | hypothetical protein | - |
| AB432_RS10120 (AB432_010120) | - | 2009110..2009496 (-) | 387 | WP_048032180.1 | hypothetical protein | - |
| AB432_RS10125 (AB432_010125) | - | 2009639..2009917 (-) | 279 | WP_235617655.1 | hypothetical protein | - |
| AB432_RS30700 | - | 2010248..2010610 (+) | 363 | WP_201265919.1 | hypothetical protein | - |
| AB432_RS10135 (AB432_010135) | - | 2010802..2011440 (-) | 639 | WP_048032181.1 | hypothetical protein | - |
| AB432_RS31475 | - | 2011598..2011738 (-) | 141 | WP_419178473.1 | hypothetical protein | - |
| AB432_RS10140 (AB432_010140) | - | 2011683..2011889 (-) | 207 | WP_048032182.1 | hypothetical protein | - |
| AB432_RS10145 (AB432_010145) | - | 2012027..2012413 (+) | 387 | WP_048032183.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| AB432_RS10155 (AB432_010155) | - | 2013229..2013723 (+) | 495 | WP_048032185.1 | hypothetical protein | - |
| AB432_RS10160 (AB432_010160) | - | 2013943..2014455 (+) | 513 | WP_048032186.1 | ParB N-terminal domain-containing protein | - |
| AB432_RS31015 | - | 2014452..2014631 (+) | 180 | WP_235617656.1 | hypothetical protein | - |
| AB432_RS31020 | - | 2014680..2014925 (+) | 246 | WP_235617657.1 | hypothetical protein | - |
| AB432_RS10170 (AB432_010170) | - | 2015189..2015422 (+) | 234 | WP_048032187.1 | hypothetical protein | - |
| AB432_RS10175 (AB432_010175) | - | 2015468..2015878 (+) | 411 | WP_048032188.1 | hypothetical protein | - |
| AB432_RS10180 (AB432_010180) | - | 2015955..2016599 (+) | 645 | WP_048032189.1 | hypothetical protein | - |
| AB432_RS31025 (AB432_010185) | - | 2016694..2017278 (+) | 585 | WP_235617658.1 | hypothetical protein | - |
| AB432_RS10190 (AB432_010190) | - | 2017295..2017609 (+) | 315 | WP_235617732.1 | phage minor head protein | - |
| AB432_RS31275 | - | 2017998..2018345 (+) | 348 | WP_268811851.1 | XkdF-like putative serine protease domain-containing protein | - |
| AB432_RS31280 | - | 2018380..2018568 (+) | 189 | WP_268811852.1 | XkdF-like putative serine protease domain-containing protein | - |
| AB432_RS31480 | - | 2018712..2018795 (+) | 84 | WP_419178481.1 | putative holin-like toxin | - |
| AB432_RS10200 (AB432_010200) | - | 2018863..2019282 (+) | 420 | WP_048032190.1 | HD domain-containing protein | - |
| AB432_RS10205 (AB432_010205) | - | 2019408..2019995 (+) | 588 | WP_048032191.1 | hypothetical protein | - |
| AB432_RS10210 (AB432_010210) | - | 2020213..2020536 (+) | 324 | WP_048032192.1 | hypothetical protein | - |
| AB432_RS10215 (AB432_010215) | - | 2020633..2020782 (+) | 150 | WP_162630234.1 | hypothetical protein | - |
| AB432_RS10220 (AB432_010220) | - | 2020919..2021356 (+) | 438 | WP_053079564.1 | hypothetical protein | - |
| AB432_RS31285 | - | 2021491..2021613 (+) | 123 | WP_256434908.1 | hypothetical protein | - |
| AB432_RS31485 | - | 2021833..2022122 (+) | 290 | Protein_1920 | YolD-like family protein | - |
| AB432_RS31490 (AB432_010230) | - | 2022276..2023289 (+) | 1014 | WP_419178482.1 | acyltransferase | - |
| AB432_RS10235 (AB432_010235) | - | 2023529..2024362 (-) | 834 | WP_048032195.1 | discoidin domain-containing protein | - |
| AB432_RS10240 (AB432_010240) | - | 2024607..2026107 (+) | 1501 | Protein_1923 | recombinase family protein | - |
| AB432_RS10245 (AB432_010245) | - | 2026141..2026514 (+) | 374 | Protein_1924 | sigma-70 family RNA polymerase sigma factor | - |
| AB432_RS30480 | - | 2026994..2027179 (-) | 186 | WP_162630235.1 | hypothetical protein | - |
| AB432_RS10250 (AB432_010250) | - | 2027231..2027563 (-) | 333 | WP_048032196.1 | DUF2834 domain-containing protein | - |
| AB432_RS31495 (AB432_010255) | - | 2027990..2028106 (+) | 117 | WP_113732267.1 | YopX family protein | - |
| AB432_RS10260 (AB432_010260) | - | 2028175..2028621 (-) | 447 | WP_082195898.1 | hypothetical protein | - |
| AB432_RS10265 (AB432_010265) | - | 2029213..2029692 (-) | 480 | WP_048032197.1 | hypothetical protein | - |
| AB432_RS10270 (AB432_010270) | - | 2030064..2030618 (+) | 555 | WP_048032198.1 | hypothetical protein | - |
| AB432_RS10275 (AB432_010275) | nucA/comI | 2030853..2031281 (-) | 429 | WP_048032199.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| AB432_RS10280 (AB432_010280) | - | 2031815..2032300 (+) | 486 | WP_048032200.1 | hypothetical protein | - |
| AB432_RS10285 (AB432_010285) | - | 2032398..2032817 (+) | 420 | WP_048032201.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15529.76 Da Isoelectric Point: 6.8630
>NTDB_id=299375 AB432_RS10275 WP_048032199.1 2030853..2031281(-) (nucA/comI) [Brevibacillus brevis strain DZQ7]
MTHRKMLMLIVVLLVGAAYFFGLVPIENKTVSNGNVDHTIVFPSDRYPQTAKHIKKAIASGKSAVCTIDRDGADENREES
LKGIPTKKGLDRDEWPMAMCAEGGTGAHIEYISPSDNRGAGSWISNQLEDFPNGTKVEILVK
MTHRKMLMLIVVLLVGAAYFFGLVPIENKTVSNGNVDHTIVFPSDRYPQTAKHIKKAIASGKSAVCTIDRDGADENREES
LKGIPTKKGLDRDEWPMAMCAEGGTGAHIEYISPSDNRGAGSWISNQLEDFPNGTKVEILVK
Nucleotide
Download Length: 429 bp
>NTDB_id=299375 AB432_RS10275 WP_048032199.1 2030853..2031281(-) (nucA/comI) [Brevibacillus brevis strain DZQ7]
ATGACACACAGAAAAATGCTGATGTTGATTGTGGTGCTGCTGGTCGGAGCCGCCTATTTCTTTGGACTTGTGCCAATAGA
GAACAAAACAGTCAGCAACGGGAACGTAGACCATACGATTGTTTTTCCATCTGATCGATACCCTCAGACTGCAAAGCATA
TCAAAAAAGCGATTGCCTCTGGGAAGTCCGCTGTATGTACAATTGACCGCGATGGAGCAGATGAAAATCGTGAAGAATCA
CTCAAAGGCATACCTACAAAAAAGGGACTCGATCGAGACGAATGGCCGATGGCAATGTGTGCTGAGGGTGGAACAGGGGC
ACATATCGAATACATATCACCATCCGATAATCGAGGAGCTGGATCGTGGATTTCCAATCAACTAGAGGATTTTCCAAACG
GAACTAAGGTTGAAATCCTGGTCAAATAA
ATGACACACAGAAAAATGCTGATGTTGATTGTGGTGCTGCTGGTCGGAGCCGCCTATTTCTTTGGACTTGTGCCAATAGA
GAACAAAACAGTCAGCAACGGGAACGTAGACCATACGATTGTTTTTCCATCTGATCGATACCCTCAGACTGCAAAGCATA
TCAAAAAAGCGATTGCCTCTGGGAAGTCCGCTGTATGTACAATTGACCGCGATGGAGCAGATGAAAATCGTGAAGAATCA
CTCAAAGGCATACCTACAAAAAAGGGACTCGATCGAGACGAATGGCCGATGGCAATGTGTGCTGAGGGTGGAACAGGGGC
ACATATCGAATACATATCACCATCCGATAATCGAGGAGCTGGATCGTGGATTTCCAATCAACTAGAGGATTTTCCAAACG
GAACTAAGGTTGAAATCCTGGTCAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
64.655 |
81.69 |
0.528 |