Detailed information NTG0299277

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETA18_RS01700
• Genome accession: NZ_CP035400
• Coordinates: 305370..306491 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103835
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 300370..311491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA18_RS01670 (ETA18_01670)	ycdA	300375..301439 (-)	1065	WP_128992373.1	DUF4352 domain-containing protein	-
ETA18_RS01675 (ETA18_01675)	-	301462..301593 (-)	132	WP_003246334.1	hypothetical protein	-
ETA18_RS01680 (ETA18_01680)	ycdB	301767..303188 (+)	1422	WP_128992374.1	YcdB/YcdC domain-containing protein	-
ETA18_RS01690 (ETA18_01690)	ycdC	303375..304736 (+)	1362	WP_088327401.1	YcdB/YcdC domain-containing protein	-
ETA18_RS01695 (ETA18_01695)	cwlK	304744..305247 (-)	504	WP_069322342.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ETA18_RS01700 (ETA18_01700)	rapF	305370..306491 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
ETA18_RS01705 (ETA18_01705)	ycdF	306598..307374 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
ETA18_RS01710 (ETA18_01710)	ycdG	307399..309084 (+)	1686	WP_128992375.1	alpha-glucosidase	-
ETA18_RS01715 (ETA18_01715)	znuA	309271..310230 (+)	960	WP_128992376.1	metal ABC transporter substrate-binding protein	-
ETA18_RS01720 (ETA18_01720)	znuC	310285..310980 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=299277 ETA18_RS01700 WP_015715201.1 305370..306491(+) (rapF) [Bacillus subtilis strain SRCM103835]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=299277 ETA18_RS01700 WP_015715201.1 305370..306491(+) (rapF) [Bacillus subtilis strain SRCM103835]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTTGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAACT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405