Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ETA10_RS20930 Genome accession   NZ_CP035397
Coordinates   3898716..3899405 (-) Length   229 a.a.
NCBI ID   WP_046161048.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103773     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3893716..3904405
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA10_RS20910 (ETA10_20910) yxeA 3894621..3894968 (-) 348 WP_003227084.1 YxeA family protein -
  ETA10_RS20915 (ETA10_20915) yxdM 3894982..3896850 (-) 1869 WP_129110608.1 ABC transporter permease YxdM -
  ETA10_RS20920 (ETA10_20920) yxdL 3896825..3897598 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  ETA10_RS20925 (ETA10_20925) yxdK 3897742..3898719 (-) 978 WP_046161047.1 two-component system sensor histidine kinase YxdK -
  ETA10_RS20930 (ETA10_20930) braR 3898716..3899405 (-) 690 WP_046161048.1 two-component system response regulator YxdJ Regulator
  ETA10_RS20935 (ETA10_20935) iolJ 3899513..3900385 (-) 873 WP_046161049.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  ETA10_RS20940 (ETA10_20940) iolI 3900406..3901242 (-) 837 WP_015715014.1 2-keto-myo-inositol isomerase -
  ETA10_RS20945 (ETA10_20945) iolH 3901328..3902197 (-) 870 WP_021481028.1 sugar phosphate isomerase/epimerase -
  ETA10_RS20950 (ETA10_20950) iolG 3902217..3903251 (-) 1035 WP_129110609.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26572.29 Da        Isoelectric Point: 4.8564

>NTDB_id=299258 ETA10_RS20930 WP_046161048.1 3898716..3899405(-) (braR) [Bacillus subtilis strain SRCM103773]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDAFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=299258 ETA10_RS20930 WP_046161048.1 3898716..3899405(-) (braR) [Bacillus subtilis strain SRCM103773]
TTGAATAAAATTATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGCCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAAATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406