Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ETA10_RS18215 Genome accession   NZ_CP035397
Coordinates   3374555..3375268 (-) Length   237 a.a.
NCBI ID   WP_015384738.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103773     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3369555..3380268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA10_RS18195 (ETA10_18195) ghrB 3369700..3370677 (+) 978 WP_087614731.1 D-glycerate dehydrogenase -
  ETA10_RS18200 (ETA10_18200) psdB 3370714..3372654 (-) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  ETA10_RS18205 (ETA10_18205) psdA 3372629..3373408 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ETA10_RS18210 (ETA10_18210) psdS 3373491..3374561 (-) 1071 WP_046160885.1 two-component sensor histidine kinase PsdS -
  ETA10_RS18215 (ETA10_18215) braR 3374555..3375268 (-) 714 WP_015384738.1 two-component system response regulator PsdR Regulator
  ETA10_RS18220 (ETA10_18220) - 3375415..3375624 (+) 210 WP_017695274.1 hypothetical protein -
  ETA10_RS18225 (ETA10_18225) yvcN 3375660..3376424 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  ETA10_RS18230 (ETA10_18230) crh 3376425..3376682 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ETA10_RS18235 (ETA10_18235) whiA 3376706..3377656 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  ETA10_RS18240 (ETA10_18240) mgfK 3377679..3378632 (-) 954 WP_046161093.1 gluconeogenesis morphogenetic factor -
  ETA10_RS18245 (ETA10_18245) rapZ 3378634..3379521 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ETA10_RS18250 (ETA10_18250) rppI 3379546..3380022 (-) 477 WP_129110575.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27529.40 Da        Isoelectric Point: 4.6774

>NTDB_id=299243 ETA10_RS18215 WP_015384738.1 3374555..3375268(-) (braR) [Bacillus subtilis strain SRCM103773]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=299243 ETA10_RS18215 WP_015384738.1 3374555..3375268(-) (braR) [Bacillus subtilis strain SRCM103773]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment