Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ETA10_RS09750 Genome accession   NZ_CP035397
Coordinates   1843066..1845069 (+) Length   667 a.a.
NCBI ID   WP_003231593.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103773     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1838066..1850069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA10_RS09710 (ETA10_09710) pghL 1838432..1839190 (+) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  ETA10_RS09715 (ETA10_09715) - 1839217..1839666 (-) 450 WP_014479935.1 YndM family protein -
  ETA10_RS09720 (ETA10_09720) fosM 1839875..1840294 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  ETA10_RS22525 - 1840218..1840557 (+) 340 Protein_1852 hypothetical protein -
  ETA10_RS09730 (ETA10_09730) dinR/lexA 1840844..1841461 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ETA10_RS09735 (ETA10_09735) yneA 1841611..1841928 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ETA10_RS09740 (ETA10_09740) dinL 1841947..1842600 (+) 654 WP_129110507.1 recombinase family protein -
  ETA10_RS09745 (ETA10_09745) ynzC 1842664..1842897 (+) 234 WP_024573193.1 DUF896 domain-containing protein -
  ETA10_RS09750 (ETA10_09750) recP/tkt 1843066..1845069 (+) 2004 WP_003231593.1 transketolase Machinery gene
  ETA10_RS09755 (ETA10_09755) sirA 1845222..1845668 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ETA10_RS09760 (ETA10_09760) yneF 1845754..1845972 (+) 219 WP_003221221.1 YneF family protein -
  ETA10_RS09765 (ETA10_09765) ynzD 1846046..1846219 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  ETA10_RS09770 (ETA10_09770) ccdA 1846439..1847146 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  ETA10_RS09775 (ETA10_09775) yneI 1847235..1847597 (+) 363 WP_003245707.1 response regulator -
  ETA10_RS09780 (ETA10_09780) yneJ 1847676..1848167 (+) 492 WP_010886519.1 CcdC family protein -
  ETA10_RS09785 (ETA10_09785) yneK 1848198..1848626 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  ETA10_RS09790 (ETA10_09790) cotM 1848860..1849252 (-) 393 WP_072592538.1 outer spore coat protein CotM -
  ETA10_RS09795 (ETA10_09795) sspP 1849333..1849479 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  ETA10_RS09800 (ETA10_09800) sspO 1849511..1849657 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72316.39 Da        Isoelectric Point: 4.7291

>NTDB_id=299191 ETA10_RS09750 WP_003231593.1 1843066..1845069(+) (recP/tkt) [Bacillus subtilis strain SRCM103773]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=299191 ETA10_RS09750 WP_003231593.1 1843066..1845069(+) (recP/tkt) [Bacillus subtilis strain SRCM103773]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCTGGACACCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTTTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAGTATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACAATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGAAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment