Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ES968_RS21710 Genome accession   NZ_CP035395
Coordinates   4062121..4062969 (-) Length   282 a.a.
NCBI ID   WP_129134456.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103697     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4057121..4067969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS21690 (ES968_21690) yyaE 4057634..4059637 (-) 2004 WP_069837910.1 molybdopterin-dependent oxidoreductase -
  ES968_RS21695 (ES968_21695) yyzM 4059688..4059894 (-) 207 WP_003226838.1 DUF951 family protein -
  ES968_RS21700 (ES968_21700) - 4059988..4061004 (-) 1017 WP_010886647.1 membrane protein -
  ES968_RS21705 (ES968_21705) yyaC 4061464..4062081 (+) 618 WP_003243890.1 spore protease YyaC -
  ES968_RS21710 (ES968_21710) spo0J 4062121..4062969 (-) 849 WP_129134456.1 stage 0 sporulation protein Spo0J Regulator
  ES968_RS21715 (ES968_21715) soj 4062962..4063723 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  ES968_RS21720 (ES968_21720) yyaB 4063971..4064411 (+) 441 WP_014481510.1 PH domain-containing protein -
  ES968_RS21725 (ES968_21725) noc 4064462..4065313 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  ES968_RS21730 (ES968_21730) rsmG 4065435..4066154 (-) 720 WP_014481512.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32224.19 Da        Isoelectric Point: 8.3881

>NTDB_id=299114 ES968_RS21710 WP_129134456.1 4062121..4062969(-) (spo0J) [Bacillus subtilis strain SRCM103697]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESLLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=299114 ES968_RS21710 WP_129134456.1 4062121..4062969(-) (spo0J) [Bacillus subtilis strain SRCM103697]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTT
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAGCGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387

Multiple sequence alignment