Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ES968_RS21430 Genome accession   NZ_CP035395
Coordinates   4015797..4016591 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain SRCM103697     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4010797..4021591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS21395 (ES968_21395) - 4010929..4011483 (-) 555 WP_015715050.1 SdpA family antimicrobial peptide system protein -
  ES968_RS21400 (ES968_21400) - 4011667..4012302 (-) 636 WP_014481470.1 SdpI family protein -
  ES968_RS21405 (ES968_21405) - 4012302..4012586 (-) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  ES968_RS21410 (ES968_21410) rocR 4012813..4014198 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  ES968_RS21415 (ES968_21415) - 4014180..4014332 (-) 153 Protein_4157 ATP-binding protein -
  ES968_RS21420 (ES968_21420) - 4014360..4014492 (-) 133 Protein_4158 hypothetical protein -
  ES968_RS21425 (ES968_21425) htrA 4014513..4015715 (-) 1203 WP_046161071.1 serine protease HtrC Regulator
  ES968_RS21430 (ES968_21430) vicX 4015797..4016591 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  ES968_RS21435 (ES968_21435) walI 4016613..4017455 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  ES968_RS21440 (ES968_21440) walH 4017442..4018809 (-) 1368 WP_014481474.1 WalRK two-component regulatory system regulator WalH -
  ES968_RS21445 (ES968_21445) walK 4018799..4020634 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  ES968_RS21450 (ES968_21450) walR 4020642..4021349 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=299111 ES968_RS21430 WP_003226939.1 4015797..4016591(-) (vicX) [Bacillus subtilis strain SRCM103697]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=299111 ES968_RS21430 WP_003226939.1 4015797..4016591(-) (vicX) [Bacillus subtilis strain SRCM103697]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTAATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATTGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAATCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment