Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ES968_RS20990 Genome accession   NZ_CP035395
Coordinates   3930045..3930734 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain SRCM103697     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3925045..3935734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS20970 (ES968_20970) yxeA 3925950..3926297 (-) 348 WP_015715011.1 YxeA family protein -
  ES968_RS20975 (ES968_20975) yxdM 3926311..3928179 (-) 1869 WP_069837878.1 ABC transporter permease YxdM -
  ES968_RS20980 (ES968_20980) yxdL 3928154..3928927 (-) 774 WP_024572301.1 ABC transporter ATP-binding protein YxdL -
  ES968_RS20985 (ES968_20985) yxdK 3929071..3930048 (-) 978 WP_069837879.1 two-component system sensor histidine kinase YxdK -
  ES968_RS20990 (ES968_20990) braR 3930045..3930734 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  ES968_RS20995 (ES968_20995) iolJ 3930842..3931714 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  ES968_RS21000 (ES968_21000) iolI 3931735..3932571 (-) 837 WP_129134448.1 2-keto-myo-inositol isomerase -
  ES968_RS21005 (ES968_21005) iolH 3932657..3933526 (-) 870 WP_014481413.1 sugar phosphate isomerase/epimerase -
  ES968_RS21010 (ES968_21010) iolG 3933546..3934580 (-) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=299109 ES968_RS20990 WP_003243527.1 3930045..3930734(-) (braR) [Bacillus subtilis strain SRCM103697]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=299109 ES968_RS20990 WP_003243527.1 3930045..3930734(-) (braR) [Bacillus subtilis strain SRCM103697]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATACCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGAGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment