Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   DOU34_RS04415 Genome accession   NZ_CP030097
Coordinates   857527..858183 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain SH-B74     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 852527..863183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DOU34_RS04390 oppF 853056..853973 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  DOU34_RS04395 - 854080..855267 (+) 1188 WP_052248589.1 putative glycoside hydrolase -
  DOU34_RS04400 - 855385..855963 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  DOU34_RS04405 spx 856142..856537 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  DOU34_RS04410 - 856595..857251 (-) 657 WP_061046903.1 TerC family protein -
  DOU34_RS20850 - 857434..857544 (+) 111 Protein_839 adaptor protein MecA -
  DOU34_RS04415 mecA 857527..858183 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  DOU34_RS04420 - 858334..859494 (+) 1161 WP_007409108.1 competence protein CoiA family protein -
  DOU34_RS04425 pepF 859722..861551 (+) 1830 WP_113629831.1 oligoendopeptidase F Regulator
  DOU34_RS20855 - 861589..861756 (-) 168 WP_003155026.1 hypothetical protein -
  DOU34_RS04430 spxH 862042..862944 (-) 903 WP_007409106.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=299103 DOU34_RS04415 WP_003155032.1 857527..858183(+) (mecA) [Bacillus amyloliquefaciens strain SH-B74]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=299103 DOU34_RS04415 WP_003155032.1 857527..858183(+) (mecA) [Bacillus amyloliquefaciens strain SH-B74]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment