Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ES968_RS18325 Genome accession   NZ_CP035395
Coordinates   3417841..3418554 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103697     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3412841..3423554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS18305 (ES968_18305) ghrB 3412986..3413963 (+) 978 WP_087614731.1 D-glycerate dehydrogenase -
  ES968_RS18310 (ES968_18310) psdB 3414000..3415940 (-) 1941 WP_015483744.1 lantibiotic ABC transporter permease PsdB -
  ES968_RS18315 (ES968_18315) psdA 3415915..3416694 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ES968_RS18320 (ES968_18320) psdS 3416777..3417847 (-) 1071 WP_021480674.1 two-component sensor histidine kinase PsdS -
  ES968_RS18325 (ES968_18325) braR 3417841..3418554 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  ES968_RS18330 (ES968_18330) - 3418701..3418909 (+) 209 Protein_3544 hypothetical protein -
  ES968_RS18335 (ES968_18335) yvcN 3418945..3419709 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  ES968_RS18340 (ES968_18340) crh 3419710..3419967 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ES968_RS18345 (ES968_18345) whiA 3419991..3420941 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  ES968_RS18350 (ES968_18350) mgfK 3420964..3421917 (-) 954 WP_069837939.1 gluconeogenesis morphogenetic factor -
  ES968_RS18355 (ES968_18355) rapZ 3421919..3422806 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ES968_RS18360 (ES968_18360) rppI 3422831..3423307 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=299094 ES968_RS18325 WP_014481000.1 3417841..3418554(-) (braR) [Bacillus subtilis strain SRCM103697]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=299094 ES968_RS18325 WP_014481000.1 3417841..3418554(-) (braR) [Bacillus subtilis strain SRCM103697]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435