Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   ES968_RS16070 Genome accession   NZ_CP035395
Coordinates   3001396..3002259 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain SRCM103697     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2996396..3007259
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS16035 (ES968_16035) mrpE 2996564..2997040 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ES968_RS16040 (ES968_16040) mrpF 2997040..2997324 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ES968_RS16045 (ES968_16045) mnhG 2997308..2997682 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ES968_RS16050 (ES968_16050) yuxO 2997721..2998101 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  ES968_RS16055 (ES968_16055) comA 2998120..2998764 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ES968_RS16060 (ES968_16060) comP 2998845..3001157 (-) 2313 WP_103330147.1 sensor histidine kinase Regulator
  ES968_RS16065 (ES968_16065) comX 3001173..3001394 (-) 222 WP_014480704.1 competence pheromone ComX -
  ES968_RS16070 (ES968_16070) comQ 3001396..3002259 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  ES968_RS16075 (ES968_16075) degQ 3002444..3002584 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ES968_RS16080 (ES968_16080) - 3002806..3002931 (+) 126 WP_003228793.1 hypothetical protein -
  ES968_RS16085 (ES968_16085) - 3003046..3003414 (+) 369 WP_050258610.1 hypothetical protein -
  ES968_RS16090 (ES968_16090) pdeH 3003390..3004619 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  ES968_RS16095 (ES968_16095) pncB 3004755..3006227 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ES968_RS16100 (ES968_16100) pncA 3006243..3006794 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=299086 ES968_RS16070 WP_014480705.1 3001396..3002259(-) (comQ) [Bacillus subtilis strain SRCM103697]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=299086 ES968_RS16070 WP_014480705.1 3001396..3002259(-) (comQ) [Bacillus subtilis strain SRCM103697]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains


Predicted by InterProScan.

(45-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439


Multiple sequence alignment