Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DPH57_RS16270 Genome accession   NZ_CP030092
Coordinates   3815364..3815759 (-) Length   131 a.a.
NCBI ID   WP_112938683.1    Uniprot ID   A0A7U5Y045
Organism   Massilia sp. YMA4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3810364..3820759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DPH57_RS16255 (DPH57_16255) - 3812059..3814374 (-) 2316 WP_112938680.1 methyl-accepting chemotaxis protein -
  DPH57_RS16260 (DPH57_16260) - 3814404..3814982 (-) 579 WP_112938681.1 chemotaxis protein CheW -
  DPH57_RS16265 (DPH57_16265) - 3814982..3815347 (-) 366 WP_112938682.1 PleD family two-component system response regulator -
  DPH57_RS16270 (DPH57_16270) pilG 3815364..3815759 (-) 396 WP_112938683.1 PleD family two-component system response regulator Regulator
  DPH57_RS16275 (DPH57_16275) - 3815945..3816097 (-) 153 WP_107140631.1 rubredoxin -
  DPH57_RS16280 (DPH57_16280) - 3816217..3817137 (+) 921 WP_112938684.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  DPH57_RS16285 (DPH57_16285) hemL 3817134..3818429 (+) 1296 WP_112938685.1 glutamate-1-semialdehyde 2,1-aminomutase -
  DPH57_RS16290 (DPH57_16290) - 3818605..3819873 (+) 1269 WP_112938686.1 Nramp family divalent metal transporter -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14187.37 Da        Isoelectric Point: 7.3213

>NTDB_id=299064 DPH57_RS16270 WP_112938683.1 3815364..3815759(-) (pilG) [Massilia sp. YMA4]
MTTTPQATGLKIMVIDDSSTIRRSAEIFLSQAGYDVVLAEDGFDALAKINDHHPALIFCDILMPRLDGYQTCALIKKSAK
FHAVPVLMLSSKDGLFDRARGAMVGSSAYLTKPFSKDSLLAAVREHTGQGQ

Nucleotide


Download         Length: 396 bp        

>NTDB_id=299064 DPH57_RS16270 WP_112938683.1 3815364..3815759(-) (pilG) [Massilia sp. YMA4]
ATGACGACAACGCCGCAAGCGACAGGTTTGAAAATCATGGTGATCGACGACAGCAGCACGATCCGCCGGTCCGCCGAGAT
CTTCCTCAGCCAGGCCGGCTATGACGTCGTGCTGGCCGAAGACGGTTTCGACGCGCTGGCCAAGATCAACGACCACCATC
CGGCGCTGATCTTCTGCGACATCCTGATGCCCCGGCTGGACGGTTACCAGACCTGCGCGCTGATCAAGAAGAGCGCGAAA
TTCCATGCCGTACCCGTGCTGATGCTGTCCTCCAAGGATGGCCTGTTCGACCGCGCGCGCGGCGCCATGGTCGGCTCGTC
CGCCTATCTCACCAAACCCTTCAGCAAAGACAGCCTGCTGGCCGCCGTGCGCGAGCACACCGGCCAGGGCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U5Y045

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.025

90.84

0.573

Multiple sequence alignment