Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ES968_RS09850 Genome accession   NZ_CP035395
Coordinates   1873760..1875763 (+) Length   667 a.a.
NCBI ID   WP_014476936.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103697     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1868760..1880763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS09810 (ES968_09810) pghL 1869126..1869884 (+) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  ES968_RS09815 (ES968_09815) - 1869911..1870360 (-) 450 WP_014479935.1 YndM family protein -
  ES968_RS09820 (ES968_09820) fosM 1870569..1870988 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  ES968_RS22775 - 1870912..1871251 (+) 340 Protein_1878 hypothetical protein -
  ES968_RS09830 (ES968_09830) dinR/lexA 1871538..1872155 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ES968_RS09835 (ES968_09835) yneA 1872305..1872622 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ES968_RS09840 (ES968_09840) dinL 1872641..1873294 (+) 654 WP_014479938.1 recombinase family protein -
  ES968_RS09845 (ES968_09845) ynzC 1873358..1873591 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ES968_RS09850 (ES968_09850) recP/tkt 1873760..1875763 (+) 2004 WP_014476936.1 transketolase Machinery gene
  ES968_RS09855 (ES968_09855) sirA 1875916..1876362 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ES968_RS09860 (ES968_09860) yneF 1876448..1876666 (+) 219 WP_003221221.1 YneF family protein -
  ES968_RS09865 (ES968_09865) ynzD 1876740..1876913 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  ES968_RS09870 (ES968_09870) ccdA 1877133..1877840 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  ES968_RS09875 (ES968_09875) yneI 1877929..1878291 (+) 363 WP_003245707.1 response regulator -
  ES968_RS09880 (ES968_09880) yneJ 1878370..1878861 (+) 492 WP_010886519.1 CcdC family protein -
  ES968_RS09885 (ES968_09885) yneK 1878892..1879320 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  ES968_RS09890 (ES968_09890) cotM 1879554..1879946 (-) 393 WP_072592538.1 outer spore coat protein CotM -
  ES968_RS09895 (ES968_09895) sspP 1880027..1880173 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  ES968_RS09900 (ES968_09900) sspO 1880205..1880351 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=299042 ES968_RS09850 WP_014476936.1 1873760..1875763(+) (recP/tkt) [Bacillus subtilis strain SRCM103697]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=299042 ES968_RS09850 WP_014476936.1 1873760..1875763(+) (recP/tkt) [Bacillus subtilis strain SRCM103697]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562