Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ES968_RS07885 Genome accession   NZ_CP035395
Coordinates   1501373..1501948 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   O34857
Organism   Bacillus subtilis strain SRCM103697     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1496373..1506948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS07855 (ES968_07855) dapD 1496561..1497271 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ES968_RS07860 (ES968_07860) dapI 1497341..1498465 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  ES968_RS07865 (ES968_07865) ykuS 1498527..1498772 (+) 246 WP_003232382.1 YkuS family protein -
  ES968_RS07870 (ES968_07870) mscT 1498809..1499612 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ES968_RS07875 (ES968_07875) ahpA 1499849..1500391 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ES968_RS07880 (ES968_07880) ykuV 1500461..1500907 (+) 447 WP_014479665.1 thiol-disulfide oxidoreductase YkuV -
  ES968_RS07885 (ES968_07885) rok 1501373..1501948 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ES968_RS07895 (ES968_07895) cse15 1503279..1504244 (-) 966 WP_014479669.1 spore protein Cse15 -
  ES968_RS07900 (ES968_07900) mobA 1504381..1504980 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  ES968_RS07905 (ES968_07905) moeB 1505031..1506050 (+) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=299024 ES968_RS07885 WP_003232378.1 1501373..1501948(+) (rok) [Bacillus subtilis strain SRCM103697]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=299024 ES968_RS07885 WP_003232378.1 1501373..1501948(+) (rok) [Bacillus subtilis strain SRCM103697]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5ZUX
  PDB 5ZUZ

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1