Detailed information NTG0298977

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ES968_RS01680
• Genome accession: NZ_CP035395
• Coordinates: 320677..321798 (+)
• Length: 373 a.a.
• NCBI ID: WP_069837225.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103697
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 315677..326798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES968_RS01655 (ES968_01655)	ycdA	315697..316761 (-)	1065	WP_088272156.1	DUF4352 domain-containing protein	-
ES968_RS01660 (ES968_01660)	-	316784..316915 (-)	132	WP_003246334.1	hypothetical protein	-
ES968_RS01665 (ES968_01665)	ycdB	317074..318495 (+)	1422	WP_069963963.1	YcdB/YcdC domain-containing protein	-
ES968_RS01670 (ES968_01670)	ycdC	318682..320043 (+)	1362	WP_129134166.1	YcdB/YcdC domain-containing protein	-
ES968_RS01675 (ES968_01675)	cwlK	320051..320554 (-)	504	WP_046380766.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ES968_RS01680 (ES968_01680)	rapF	320677..321798 (+)	1122	WP_069837225.1	response regulator aspartate phosphatase RapJ	Regulator
ES968_RS01685 (ES968_01685)	ycdF	321905..322681 (+)	777	WP_129134167.1	SDR family oxidoreductase	-
ES968_RS01690 (ES968_01690)	ycdG	322706..324391 (+)	1686	WP_069963965.1	alpha-glucosidase	-
ES968_RS01695 (ES968_01695)	znuA	324578..325537 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
ES968_RS01700 (ES968_01700)	znuC	325592..326287 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44354.20 Da
• Isoelectric Point: 4.8344

>NTDB_id=298977 ES968_RS01680 WP_069837225.1 320677..321798(+) (rapF) [Bacillus subtilis strain SRCM103697]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAAEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLLNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=298977 ES968_RS01680 WP_069837225.1 320677..321798(+) (rapF) [Bacillus subtilis strain SRCM103697]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAATTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGACTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCGTATGATCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAACTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGTTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGCTGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (219-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405