Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   ES968_RS00220 Genome accession   NZ_CP035395
Coordinates   41108..41935 (+) Length   275 a.a.
NCBI ID   WP_041338386.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103697     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 36108..46935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS00195 (ES968_00195) efpO 37171..38613 (+) 1443 WP_129134152.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  ES968_RS00200 (ES968_00200) tmk 38610..39248 (+) 639 WP_015253015.1 dTMP kinase -
  ES968_RS00205 (ES968_00205) darA 39322..39651 (+) 330 WP_088272133.1 cyclic di-AMP receptor DarA -
  ES968_RS00210 (ES968_00210) yaaR 39664..40104 (+) 441 WP_009966249.1 YaaR family protein -
  ES968_RS00215 (ES968_00215) holB 40116..41105 (+) 990 WP_129134153.1 DNA polymerase III subunit delta' -
  ES968_RS00220 (ES968_00220) yaaT 41108..41935 (+) 828 WP_041338386.1 competence/sporulation regulator complex protein RicT Regulator
  ES968_RS00225 (ES968_00225) yabA 41950..42309 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  ES968_RS00230 (ES968_00230) trmNF 42368..43111 (+) 744 WP_041338388.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ES968_RS00235 (ES968_00235) yazA 43098..43397 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  ES968_RS00240 (ES968_00240) rsmI 43372..44250 (+) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ES968_RS00245 (ES968_00245) abrB 44299..44589 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31247.11 Da        Isoelectric Point: 4.7741

>NTDB_id=298969 ES968_RS00220 WP_041338386.1 41108..41935(+) (yaaT) [Bacillus subtilis strain SRCM103697]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=298969 ES968_RS00220 WP_041338386.1 41108..41935(+) (yaaT) [Bacillus subtilis strain SRCM103697]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGATGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGAGATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTATGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.273

100

0.993