Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ES967_RS20260 Genome accession   NZ_CP035394
Coordinates   3897580..3898269 (-) Length   229 a.a.
NCBI ID   WP_029318588.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103696     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3892580..3903269
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES967_RS20240 (ES967_20240) yxeA 3893485..3893832 (-) 348 WP_015715011.1 YxeA family protein -
  ES967_RS20245 (ES967_20245) yxdM 3893846..3895714 (-) 1869 WP_015715012.1 ABC transporter permease YxdM -
  ES967_RS20250 (ES967_20250) yxdL 3895689..3896462 (-) 774 WP_032676945.1 ABC transporter ATP-binding protein YxdL -
  ES967_RS20255 (ES967_20255) yxdK 3896606..3897583 (-) 978 WP_003227076.1 two-component system sensor histidine kinase YxdK -
  ES967_RS20260 (ES967_20260) braR 3897580..3898269 (-) 690 WP_029318588.1 two-component system response regulator YxdJ Regulator
  ES967_RS20265 (ES967_20265) iolJ 3898377..3899249 (-) 873 WP_015250854.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  ES967_RS20270 (ES967_20270) iolI 3899270..3900106 (-) 837 WP_003227070.1 2-keto-myo-inositol isomerase -
  ES967_RS20275 (ES967_20275) iolH 3900192..3901061 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  ES967_RS20280 (ES967_20280) iolG 3901081..3902115 (-) 1035 WP_003227066.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26584.38 Da        Isoelectric Point: 4.9502

>NTDB_id=298959 ES967_RS20260 WP_029318588.1 3897580..3898269(-) (braR) [Bacillus subtilis strain SRCM103696]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSLLSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=298959 ES967_RS20260 WP_029318588.1 3897580..3898269(-) (braR) [Bacillus subtilis strain SRCM103696]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGTGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCTTGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(153-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406