Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   DPF84_RS00885 Genome accession   NZ_CP030076
Coordinates   156836..157462 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain 20710     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 151836..162462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DPF84_RS00870 (DPF84_00870) helD 152075..154129 (-) 2055 WP_045345690.1 DNA helicase IV -
  DPF84_RS00875 (DPF84_00875) - 154252..154698 (+) 447 WP_003858149.1 YccF domain-containing protein -
  DPF84_RS00880 (DPF84_00880) yccS 154717..156879 (+) 2163 WP_045345689.1 YccS family putative transporter -
  DPF84_RS00885 (DPF84_00885) sxy/tfoX 156836..157462 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  DPF84_RS00890 (DPF84_00890) sulA 157680..158189 (+) 510 WP_003858155.1 SOS-induced cell division inhibitor SulA -
  DPF84_RS00895 (DPF84_00895) ompA 158546..159598 (+) 1053 WP_003858156.1 porin OmpA -
  DPF84_RS00900 (DPF84_00900) matP 159664..160116 (-) 453 WP_003858158.1 macrodomain Ter protein MatP -
  DPF84_RS00905 (DPF84_00905) - 160303..162063 (+) 1761 WP_003858160.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=298946 DPF84_RS00885 WP_023315767.1 156836..157462(-) (sxy/tfoX) [Enterobacter hormaechei strain 20710]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=298946 DPF84_RS00885 WP_023315767.1 156836..157462(-) (sxy/tfoX) [Enterobacter hormaechei strain 20710]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment