Detailed information NTG0298917

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ES967_RS12960
• Genome accession: NZ_CP035394
• Coordinates: 2505810..2506943 (-)
• Length: 377 a.a.
• NCBI ID: WP_029318105.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103696
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2500810..2511943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES967_RS12935 (ES967_12935)	-	2502068..2502301 (+)	234	Protein_2488	helix-turn-helix domain-containing protein	-
ES967_RS12940 (ES967_12940)	arsC	2502512..2502931 (-)	420	WP_029318100.1	arsenate reductase (thioredoxin)	-
ES967_RS12945 (ES967_12945)	acr3	2502943..2503983 (-)	1041	WP_032722149.1	arsenite efflux transporter Acr3	-
ES967_RS12950 (ES967_12950)	arsK	2504006..2504446 (-)	441	WP_032722151.1	ArsI/CadI family heavy metal resistance metalloenzyme	-
ES967_RS12955 (ES967_12955)	arsR	2504505..2504822 (-)	318	WP_029318103.1	arsenical resistance operon transcriptional regulator ArsR	-
ES967_RS21055	-	2505662..2505820 (-)	159	WP_162830452.1	hypothetical protein	-
ES967_RS12960 (ES967_12960)	rapC	2505810..2506943 (-)	1134	WP_029318105.1	tetratricopeptide repeat protein	Regulator
ES967_RS12965 (ES967_12965)	phrE	2507354..2507488 (+)	135	WP_014114495.1	phosphatase RapE inhibitor PhrE	-
ES967_RS12970 (ES967_12970)	-	2507623..2508474 (-)	852	WP_029318106.1	aldo/keto reductase	-
ES967_RS12975 (ES967_12975)	-	2508646..2509089 (+)	444	WP_029318107.1	MerR family transcriptional regulator	-
ES967_RS21175	-	2509290..2509439 (-)	150	WP_229762698.1	hypothetical protein	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 44544.89 Da
• Isoelectric Point: 5.4626

>NTDB_id=298917 ES967_RS12960 WP_029318105.1 2505810..2506943(-) (rapC) [Bacillus subtilis strain SRCM103696]
MNPVLPSSHVGVKITEWYKMIRQFSVPDAEILKAEVEREIKQMEEDEYLLIYYSLMSFRHQLMLDYLEPEKKYRTARPTI
SELLEKIEAPQKKLTGLLKYYSLFFRGMYEFDQQEFVEAINYYRKAEKELYAVTDEIEQAEFHFKVAEAYYNMKQTHVSM
HHILKALEIYDQNPLYTVRKIQSLFVIVGNYLDFKHYEKGLKHLEEALKLSKELGHDRLISSALYNLGECYHYMGQPSKA
EGYLKEAAEVAEKANLRTLPHTLHSLATVLFKQEKFNEGQKVLHQGIETAQKFNDELFLSMNKFLNALYIESVDKQGILN
ILNDLNESHMFSFTEHITLLTAEYYREGGEFEESSFFYDKMVEAQLQIQRGDCLYEY

Nucleotide

• Length: 1134 bp

>NTDB_id=298917 ES967_RS12960 WP_029318105.1 2505810..2506943(-) (rapC) [Bacillus subtilis strain SRCM103696]
GTGAATCCGGTTTTACCTTCCTCACATGTAGGGGTTAAGATTACCGAATGGTATAAGATGATACGTCAGTTTAGTGTTCC
GGATGCTGAAATTTTAAAAGCAGAAGTTGAAAGAGAAATCAAACAGATGGAAGAGGATGAGTACTTACTAATTTATTACT
CCCTCATGAGCTTTCGACACCAACTTATGCTCGACTACTTAGAGCCAGAAAAAAAGTATAGAACAGCACGTCCAACCATC
TCAGAATTACTTGAAAAAATTGAAGCTCCCCAAAAGAAATTAACCGGTCTCCTGAAATATTACTCATTATTTTTCCGTGG
TATGTATGAATTCGATCAGCAAGAATTCGTCGAAGCTATTAATTATTACCGTAAAGCTGAAAAAGAACTTTATGCTGTTA
CTGATGAAATCGAACAAGCTGAATTTCATTTTAAAGTAGCAGAAGCTTATTACAACATGAAACAAACTCACGTTTCCATG
CACCACATTTTAAAGGCATTGGAGATTTATGATCAGAATCCACTGTATACTGTAAGGAAAATTCAAAGCTTGTTTGTAAT
CGTTGGTAACTATCTTGATTTTAAACATTATGAAAAAGGATTGAAACATCTTGAAGAAGCTCTGAAACTTTCTAAAGAAT
TGGGCCACGACAGACTAATAAGTTCGGCTCTTTATAATTTAGGCGAATGTTATCATTACATGGGACAACCAAGTAAAGCT
GAGGGATATTTGAAAGAAGCAGCTGAAGTTGCAGAAAAAGCAAATTTAAGGACACTTCCTCATACGCTTCATTCGTTGGC
CACAGTTTTATTCAAGCAAGAAAAGTTTAATGAAGGACAGAAGGTTTTGCATCAAGGGATCGAAACAGCACAAAAATTTA
ATGACGAACTTTTCTTATCGATGAATAAGTTTCTGAATGCTTTATATATTGAGTCAGTTGATAAACAGGGTATCCTTAAT
ATATTGAATGATCTTAATGAAAGTCACATGTTCTCTTTTACGGAACACATAACGTTGCTTACTGCAGAATATTATAGAGA
AGGCGGAGAATTTGAAGAATCCAGTTTTTTCTACGATAAAATGGTTGAAGCGCAGCTTCAAATTCAGCGAGGTGACTGTT
TATATGAGTATTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (197-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	43.467	99.469	0.432
rapF	Bacillus subtilis subsp. subtilis str. 168	40.212	100	0.403