Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   DOZ91_RS17385 Genome accession   NZ_CP030063
Coordinates   3698002..3698952 (+) Length   316 a.a.
NCBI ID   WP_053536781.1    Uniprot ID   A0A9X1IUS9
Organism   Peribacillus frigoritolerans strain ZB201705     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3693002..3703952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DOZ91_RS17355 (DOZ91_17720) - 3693149..3693844 (-) 696 WP_127777700.1 WxL domain-containing protein -
  DOZ91_RS17360 (DOZ91_17725) - 3693873..3694562 (-) 690 WP_127777701.1 WxL domain-containing protein -
  DOZ91_RS17365 (DOZ91_17730) - 3695978..3696241 (+) 264 WP_127777702.1 HD domain-containing protein -
  DOZ91_RS17375 (DOZ91_17740) - 3696965..3697165 (+) 201 WP_164855071.1 YolD-like family protein -
  DOZ91_RS17380 (DOZ91_17745) - 3697395..3697736 (-) 342 WP_226990537.1 DUF1450 domain-containing protein -
  DOZ91_RS17385 (DOZ91_17750) ceuB 3698002..3698952 (+) 951 WP_053536781.1 ABC transporter permease Machinery gene
  DOZ91_RS17390 (DOZ91_17755) - 3698945..3699892 (+) 948 WP_127777704.1 iron chelate uptake ABC transporter family permease subunit -
  DOZ91_RS17395 (DOZ91_17760) - 3699886..3700644 (+) 759 WP_034310071.1 ABC transporter ATP-binding protein -
  DOZ91_RS17400 (DOZ91_17765) - 3700856..3701803 (+) 948 WP_127777705.1 siderophore ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34941.26 Da        Isoelectric Point: 9.6490

>NTDB_id=298869 DOZ91_RS17385 WP_053536781.1 3698002..3698952(+) (ceuB) [Peribacillus frigoritolerans strain ZB201705]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLNLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYLSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKFIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=298869 DOZ91_RS17385 WP_053536781.1 3698002..3698952(+) (ceuB) [Peribacillus frigoritolerans strain ZB201705]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CCTGGATTTACTGAATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCTAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCT
GGTACCATGGACTCTGCAAGGCTGGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATCT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTAGGATCGATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGTGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATCTAAGTATCCC
GCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCGGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGTTTATAGTCAATTTTGGATTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCGAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTCTTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTAATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

100

0.503

Multiple sequence alignment