Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ES965_RS09675 Genome accession   NZ_CP035391
Coordinates   1897229..1897846 (-) Length   205 a.a.
NCBI ID   WP_024573195.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103689     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1892229..1902846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES965_RS09645 (ES965_09645) yndJ 1892548..1894188 (+) 1641 WP_129092443.1 YndJ family protein -
  ES965_RS09650 (ES965_09650) - 1894276..1894590 (+) 315 WP_003245621.1 hypothetical protein -
  ES965_RS09655 (ES965_09655) pghL 1894816..1895574 (+) 759 WP_129092444.1 gamma-polyglutamate hydrolase PghL -
  ES965_RS09660 (ES965_09660) - 1895601..1896050 (-) 450 WP_129092445.1 YndM family protein -
  ES965_RS09665 (ES965_09665) fosM 1896257..1896691 (+) 435 WP_024573196.1 FosM family fosfomycin resistance protein -
  ES965_RS21770 - 1896600..1896942 (+) 343 Protein_1837 hypothetical protein -
  ES965_RS09675 (ES965_09675) dinR/lexA 1897229..1897846 (-) 618 WP_024573195.1 transcriptional repressor LexA Regulator
  ES965_RS09680 (ES965_09680) yneA 1897996..1898313 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ES965_RS09685 (ES965_09685) dinL 1898332..1898985 (+) 654 WP_024573194.1 recombinase family protein -
  ES965_RS09690 (ES965_09690) ynzC 1899049..1899282 (+) 234 WP_024573193.1 DUF896 domain-containing protein -
  ES965_RS09695 (ES965_09695) recP/tkt 1899451..1901454 (+) 2004 WP_124059913.1 transketolase Machinery gene
  ES965_RS09700 (ES965_09700) sirA 1901607..1902053 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ES965_RS09705 (ES965_09705) yneF 1902139..1902357 (+) 219 WP_003221221.1 YneF family protein -
  ES965_RS09710 (ES965_09710) ynzD 1902431..1902604 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22863.38 Da        Isoelectric Point: 5.1505

>NTDB_id=298736 ES965_RS09675 WP_024573195.1 1897229..1897846(-) (dinR/lexA) [Bacillus subtilis strain SRCM103689]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEED
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=298736 ES965_RS09675 WP_024573195.1 1897229..1897846(-) (dinR/lexA) [Bacillus subtilis strain SRCM103689]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGAGGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(84-198)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

99.512

100

0.995

Multiple sequence alignment