Detailed information NTG0298670

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ES965_RS01655
• Genome accession: NZ_CP035391
• Coordinates: 295583..296704 (+)
• Length: 373 a.a.
• NCBI ID: WP_129092224.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103689
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290583..301704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES965_RS01630 (ES965_01630)	ycdA	290589..291653 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
ES965_RS01635 (ES965_01635)	-	291654..291806 (-)	153	WP_021481864.1	hypothetical protein	-
ES965_RS01640 (ES965_01640)	ycdB	291980..293401 (+)	1422	WP_129092222.1	YcdB/YcdC domain-containing protein	-
ES965_RS01645 (ES965_01645)	ycdC	293588..294949 (+)	1362	WP_129092223.1	YcdB/YcdC domain-containing protein	-
ES965_RS01650 (ES965_01650)	cwlK	294957..295460 (-)	504	WP_124073440.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
ES965_RS01655 (ES965_01655)	rapF	295583..296704 (+)	1122	WP_129092224.1	response regulator aspartate phosphatase RapJ	Regulator
ES965_RS01660 (ES965_01660)	ycdF	296812..297588 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
ES965_RS01665 (ES965_01665)	ycdG	297613..299298 (+)	1686	WP_129092225.1	alpha-glucosidase	-
ES965_RS01670 (ES965_01670)	znuA	299485..300444 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
ES965_RS01675 (ES965_01675)	znuC	300499..301194 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44429.28 Da
• Isoelectric Point: 4.8371

>NTDB_id=298670 ES965_RS01655 WP_129092224.1 295583..296704(+) (rapF) [Bacillus subtilis strain SRCM103689]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRQMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=298670 ES965_RS01655 WP_129092224.1 295583..296704(+) (rapF) [Bacillus subtilis strain SRCM103689]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATTTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTTACCCACTTGTGCAGCGCTTTAGAACATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCAGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (196-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	42.697	95.442	0.408