Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ES963_RS18655 Genome accession   NZ_CP035390
Coordinates   3460021..3460734 (-) Length   237 a.a.
NCBI ID   WP_015384738.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103641     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3455021..3465734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES963_RS18635 (ES963_18635) ghrB 3455166..3456143 (+) 978 WP_087614731.1 D-glycerate dehydrogenase -
  ES963_RS18640 (ES963_18640) psdB 3456180..3458120 (-) 1941 WP_015483744.1 lantibiotic ABC transporter permease PsdB -
  ES963_RS18645 (ES963_18645) psdA 3458095..3458874 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ES963_RS18650 (ES963_18650) psdS 3458957..3460027 (-) 1071 WP_021480674.1 two-component sensor histidine kinase PsdS -
  ES963_RS18655 (ES963_18655) braR 3460021..3460734 (-) 714 WP_015384738.1 two-component system response regulator PsdR Regulator
  ES963_RS18660 (ES963_18660) - 3460881..3461090 (+) 210 WP_017695274.1 hypothetical protein -
  ES963_RS18665 (ES963_18665) yvcN 3461126..3461890 (-) 765 WP_087614732.1 arylamine N-acetyltransferase -
  ES963_RS18670 (ES963_18670) crh 3461891..3462148 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ES963_RS18675 (ES963_18675) whiA 3462172..3463122 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  ES963_RS18680 (ES963_18680) mgfK 3463145..3464098 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  ES963_RS18685 (ES963_18685) rapZ 3464100..3464987 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ES963_RS18690 (ES963_18690) rppI 3465012..3465488 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27529.40 Da        Isoelectric Point: 4.6774

>NTDB_id=298637 ES963_RS18655 WP_015384738.1 3460021..3460734(-) (braR) [Bacillus subtilis strain SRCM103641]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=298637 ES963_RS18655 WP_015384738.1 3460021..3460734(-) (braR) [Bacillus subtilis strain SRCM103641]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment