Detailed information NTG0298361

Bioinformatically predicted

Overview

• Name: vicX
• Type: Regulator
• Locus tag: DK875_RS02855
• Genome accession: NZ_CP030020
• Coordinates: 576280..577083 (+)
• Length: 267 a.a.
• NCBI ID: WP_002935843.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ISU2514
• Function: require for competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	577820..579022	576280..577083	flank	737

Gene organization within MGE regions

Location: 576280..579022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DK875_RS02855 (DK875_02985)	vicX	576280..577083 (+)	804	WP_002935843.1	MBL fold metallo-hydrolase	Regulator
DK875_RS02860 (DK875_02995)	-	577820..579022 (-)	1203	WP_280635075.1	IS110-like element ISSsu7 family transposase	-

Sequence

Protein

• Length: 267 a.a.
• Molecular weight: 29659.75 Da
• Isoelectric Point: 5.7755

>NTDB_id=298361 DK875_RS02855 WP_002935843.1 576280..577083(+) (vicX) [Streptococcus suis strain ISU2514]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATPLTKI

Nucleotide

• Length: 804 bp

>NTDB_id=298361 DK875_RS02855 WP_002935843.1 576280..577083(+) (vicX) [Streptococcus suis strain ISU2514]
ATGATCGGAAAAGGTTTTAATTATAGTATTTTAGCTTCGGGGTCCAGCGGGAATTGTTTTTACCTAGAAACAGATAAAAA
GAAAATCTTAGTGGATGCTGGCTTATCAGGGAAAAAGATTACCAGTCTTTTGGCGGAAATTGATCGAAAGCCTGAGGATA
TTGATGCTATCCTGGTAACGCATGAACATAGCGATCACATCCATGGTATCGGTGTTTTAGCACGTAAGTATGGGATGGAC
ATTTATGCCAATGAATTGACCTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTTGA
ATTGGGTGCTATGAAGACTTTTGGCGACCTAGATATTGAGTCCTTTGGAGTTAGCCATGATGCTGCATGTCCGCAATTTT
ACCGTTTTATGAAGGATGACAAATCCTTTGTTATGTTGACGGATACAGGCTATGTCAGTGACCGCATGGTTGGAATTGTA
GAAAATGCCGATGCTTATTTGATTGAATCCAACCATGATATTGAAATTTTGCGCTCGGGTTCTTACTCTTGGAACCTCAA
ACAACGGATTTTGTCAGATAAGGGTCATCTTTGTAATGAAGATGGAGCTGATGCCATGATTCGCTCGTTGGGAAATCGGA
CCAAAAAGATTTACCTAGGGCATTTGTCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAGTTG
GCGCAGGCTGATTTAGGAGTTGGAGTGGATTTCCAAGTCTATGACACATCGCCAGATACAGCGACTCCCTTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (15-160)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicX	Streptococcus mutans UA159	77.154	100	0.772