Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   A7J09_RS10325 Genome accession   NZ_CP030015
Coordinates   2140389..2141102 (-) Length   237 a.a.
NCBI ID   WP_029178683.1    Uniprot ID   -
Organism   Streptococcus suis strain ISU2812     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2135389..2146102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J09_RS10305 (A7J09_10510) - 2136044..2136697 (-) 654 WP_024406824.1 GNAT family N-acetyltransferase -
  A7J09_RS10310 (A7J09_10515) - 2136721..2139054 (-) 2334 WP_002935942.1 endonuclease MutS2 -
  A7J09_RS10315 (A7J09_10520) - 2139475..2140023 (-) 549 WP_002935945.1 CvpA family protein -
  A7J09_RS10320 (A7J09_10525) - 2140020..2140331 (-) 312 WP_002935948.1 hypothetical protein -
  A7J09_RS10325 (A7J09_10530) treR 2140389..2141102 (-) 714 WP_029178683.1 trehalose operon repressor Regulator
  A7J09_RS10330 (A7J09_10535) treP 2141335..2143330 (+) 1996 Protein_1999 PTS system trehalose-specific EIIBC component -
  A7J09_RS10335 (A7J09_10540) treC 2143411..2145036 (+) 1626 WP_029178684.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27217.10 Da        Isoelectric Point: 6.7419

>NTDB_id=298279 A7J09_RS10325 WP_029178683.1 2140389..2141102(-) (treR) [Streptococcus suis strain ISU2812]
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQELYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNVLQLSTKTDVVSLDMITVNSSLSHLTGFETYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
EYLENKLGLDIAYAQKEITVEPTSREERDLMQIQDDYLVLIKSRVYLGDTRQFQYTESKHKIDKFRFVDFARRKHSL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=298279 A7J09_RS10325 WP_029178683.1 2140389..2141102(-) (treR) [Streptococcus suis strain ISU2812]
ATGAAAAAATACCAAGAAATTTATAATGACTTAAAAGAAAAAATACGGACAAATGTTTATCCGGCAGAAAGCTCCCTACC
GACAGAACAGCAGCTCCAGGAACTCTATGGTGTTAGTCGTGATACGGTTCGTAAGGCGTTGGCGATTTTGACTGAGGGAG
GTTTGATTCAAAAAGTGCAAGGGCGTGGTTCAATGGTCCTTAAGCAAGAAATTCTCAATTTCCCAGTTTCAGGTTTAACT
TCCTATCAGGAATTGACAAATGTTCTCCAGCTTTCTACCAAGACAGATGTTGTCAGCTTAGATATGATTACCGTTAATAG
TAGCCTTTCGCATTTGACAGGCTTTGAGACGTATAGCAAGGTGTGGAAAGTTGTCCGTACACGTTCGATTGACGGTAAAG
TCTCCGTTGTGGATACAGATTATCTTGCTGTCGATGTCGTGCCAGAGTTGACAACTGCTATTGCTGAAAAATCCATCTAC
GAATACCTAGAAAATAAGTTAGGCCTTGATATTGCTTATGCACAAAAAGAGATTACGGTAGAGCCGACCAGTCGAGAAGA
ACGAGATTTGATGCAGATTCAGGATGATTATCTGGTGTTGATAAAATCCAGGGTCTACTTAGGAGATACGCGACAATTTC
AATACACTGAAAGTAAGCACAAGATTGATAAATTCCGCTTTGTAGATTTTGCTCGTAGAAAGCATTCTTTATAG

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-226)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

52.137

98.734

0.515

Multiple sequence alignment