Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   DN066_RS15575 Genome accession   NZ_CP030007
Coordinates   3168535..3169161 (-) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei subsp. xiangfangensis strain Pb204     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3163535..3174161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DN066_RS15560 (DN066_15560) helD 3163774..3165828 (-) 2055 WP_023296275.1 DNA helicase IV -
  DN066_RS15565 (DN066_15565) - 3165951..3166397 (+) 447 WP_003858149.1 YccF domain-containing protein -
  DN066_RS15570 (DN066_15570) yccS 3166416..3168578 (+) 2163 WP_015570895.1 YccS family putative transporter -
  DN066_RS15575 (DN066_15575) sxy/tfoX 3168535..3169161 (-) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  DN066_RS15580 (DN066_15580) sulA 3169379..3169888 (+) 510 WP_032104231.1 SOS-induced cell division inhibitor SulA -
  DN066_RS15585 (DN066_15585) ompA 3170245..3171297 (+) 1053 WP_017694761.1 porin OmpA -
  DN066_RS15590 (DN066_15590) matP 3171363..3171815 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  DN066_RS15595 (DN066_15595) - 3172002..3173762 (+) 1761 WP_032647912.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=298233 DN066_RS15575 WP_017384804.1 3168535..3169161(-) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain Pb204]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=298233 DN066_RS15575 WP_017384804.1 3168535..3169161(-) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain Pb204]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACACTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment