Detailed information NTG0297987

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH15_RS00220
• Genome accession: NZ_CP035265
• Coordinates: 40103..40996 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901920
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 35103..45996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH15_RS00185 (EQH15_00200)	-	35419..36588 (+)	1170	WP_000366380.1	pyridoxal phosphate-dependent aminotransferase	-
EQH15_RS00190 (EQH15_00205)	recO	36585..37355 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
EQH15_RS00195 (EQH15_00210)	plsX	37352..38344 (+)	993	WP_000717458.1	phosphate acyltransferase PlsX	-
EQH15_RS00200 (EQH15_00215)	-	38350..38583 (+)	234	WP_000136447.1	acyl carrier protein	-
EQH15_RS00205 (EQH15_00220)	-	38620..38919 (+)	300	Protein_34	transposase family protein	-
EQH15_RS00210 (EQH15_00225)	blpU	39122..39352 (+)	231	WP_001093075.1	bacteriocin-like peptide BlpU	-
EQH15_RS10775	-	39355..39480 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
EQH15_RS00215 (EQH15_00230)	-	39888..40082 (+)	195	WP_000756776.1	hypothetical protein	-
EQH15_RS00220 (EQH15_00235)	comR	40103..40996 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
EQH15_RS00225 (EQH15_00240)	-	41539..41835 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
EQH15_RS00230 (EQH15_00245)	-	41842..42978 (+)	1137	WP_000698828.1	hypothetical protein	-
EQH15_RS00235 (EQH15_00250)	-	42975..43457 (+)	483	WP_001232094.1	stage II sporulation protein M	-
EQH15_RS00240 (EQH15_00255)	-	43454..44050 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
EQH15_RS00245 (EQH15_00260)	-	44031..44522 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=297987 EQH15_RS00220 WP_000343888.1 40103..40996(+) (comR) [Streptococcus pneumoniae strain TVO_1901920]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=297987 EQH15_RS00220 WP_000343888.1 40103..40996(+) (comR) [Streptococcus pneumoniae strain TVO_1901920]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37