Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BCERKBAB4_RS09610 | Genome accession | NC_010184 |
| Coordinates | 1932581..1932868 (+) | Length | 95 a.a. |
| NCBI ID | WP_002012401.1 | Uniprot ID | A0A366G1Y4 |
| Organism | Bacillus mycoides KBAB4 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1927581..1937868
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCERKBAB4_RS09590 (BcerKBAB4_1859) | - | 1928764..1928964 (+) | 201 | WP_002141377.1 | DUF4083 domain-containing protein | - |
| BCERKBAB4_RS09595 (BcerKBAB4_1860) | - | 1928992..1929453 (+) | 462 | WP_002141378.1 | NUDIX hydrolase | - |
| BCERKBAB4_RS09600 (BcerKBAB4_1861) | nadE | 1929498..1930316 (-) | 819 | WP_002141379.1 | ammonia-dependent NAD(+) synthetase | - |
| BCERKBAB4_RS09605 (BcerKBAB4_1862) | - | 1930581..1932461 (+) | 1881 | WP_012260769.1 | FtsX-like permease family protein | - |
| BCERKBAB4_RS09610 (BcerKBAB4_1863) | abrB | 1932581..1932868 (+) | 288 | WP_002012401.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BCERKBAB4_RS09615 (BcerKBAB4_1864) | - | 1933203..1934153 (+) | 951 | WP_002012402.1 | serine protease | - |
| BCERKBAB4_RS09620 (BcerKBAB4_1865) | - | 1934194..1934502 (-) | 309 | WP_002141381.1 | ArsR/SmtB family transcription factor | - |
| BCERKBAB4_RS09625 (BcerKBAB4_1866) | - | 1934610..1935545 (+) | 936 | WP_012260770.1 | aldo/keto reductase | - |
| BCERKBAB4_RS32855 | - | 1935565..1935769 (+) | 205 | Protein_1875 | hypothetical protein | - |
| BCERKBAB4_RS09635 (BcerKBAB4_1867) | - | 1935800..1936024 (-) | 225 | WP_002141385.1 | hypothetical protein | - |
| BCERKBAB4_RS09640 (BcerKBAB4_1868) | - | 1936109..1936456 (-) | 348 | WP_000426320.1 | DUF4257 domain-containing protein | - |
| BCERKBAB4_RS09645 (BcerKBAB4_1869) | - | 1936653..1937180 (+) | 528 | WP_002141386.1 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10647.42 Da Isoelectric Point: 6.9795
>NTDB_id=29791 BCERKBAB4_RS09610 WP_002012401.1 1932581..1932868(+) (abrB) [Bacillus mycoides KBAB4]
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
MKATGIIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSDQNISLANGNITVSIEGAK
HVIKEIEQFLNKSKI
Nucleotide
Download Length: 288 bp
>NTDB_id=29791 BCERKBAB4_RS09610 WP_002012401.1 1932581..1932868(+) (abrB) [Bacillus mycoides KBAB4]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCATACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
ATGAAAGCAACAGGAATTATTCGAAAAGTAGATGAATTGGGACGGATAGTTATTCCTAAAGAATTACGGGATGTATTAGG
AATACAAATCAAATCACCACTTGAAATTTTTGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCATACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAATATTTCATTAGCAAATGGAAACATTACTGTTAGTATAGAAGGCGCAAAA
CATGTAATAAAAGAAATTGAGCAGTTTTTGAACAAGAGTAAGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.383 |
98.947 |
0.558 |