Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   EQH16_RS03090 Genome accession   NZ_CP035264
Coordinates   579851..580117 (+) Length   88 a.a.
NCBI ID   WP_001819358.1    Uniprot ID   Q8DQT3
Organism   Streptococcus pneumoniae strain TVO_1901921     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 574851..585117
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH16_RS03070 (EQH16_03190) - 575065..575574 (+) 510 WP_000619941.1 N-acetyltransferase -
  EQH16_RS03075 (EQH16_03195) pheT 575651..578053 (+) 2403 WP_000909142.1 phenylalanine--tRNA ligase subunit beta -
  EQH16_RS03080 (EQH16_03200) - 578121..579122 (-) 1002 WP_000597993.1 endonuclease/exonuclease/phosphatase family protein -
  EQH16_RS03085 (EQH16_03205) - 579278..579725 (+) 448 Protein_612 IS30 family transposase -
  EQH16_RS03090 (EQH16_03210) HI0659 579851..580117 (+) 267 WP_001819358.1 helix-turn-helix domain-containing protein Machinery gene
  EQH16_RS03095 (EQH16_03215) metE 580378..582627 (+) 2250 WP_000108185.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EQH16_RS03100 (EQH16_03220) metF 582691..583557 (+) 867 WP_000089980.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9667.20 Da        Isoelectric Point: 4.6537

>NTDB_id=297890 EQH16_RS03090 WP_001819358.1 579851..580117(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901921]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VRLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=297890 EQH16_RS03090 WP_001819358.1 579851..580117(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901921]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCGACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DQT3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

58.442

87.5

0.511

Multiple sequence alignment