Detailed information NTG0297869

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH16_RS00490
• Genome accession: NZ_CP035264
• Coordinates: 76199..77092 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901921
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 71199..82092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH16_RS00455 (EQH16_00465)	-	71515..72684 (+)	1170	WP_000366380.1	pyridoxal phosphate-dependent aminotransferase	-
EQH16_RS00460 (EQH16_00470)	recO	72681..73451 (+)	771	WP_000616164.1	DNA repair protein RecO	Machinery gene
EQH16_RS00465 (EQH16_00475)	plsX	73448..74440 (+)	993	WP_000717458.1	phosphate acyltransferase PlsX	-
EQH16_RS00470 (EQH16_00480)	-	74446..74679 (+)	234	WP_000136447.1	acyl carrier protein	-
EQH16_RS00475 (EQH16_00485)	-	74716..75015 (+)	300	Protein_88	transposase family protein	-
EQH16_RS00480 (EQH16_00490)	blpU	75218..75448 (+)	231	WP_001093075.1	bacteriocin-like peptide BlpU	-
EQH16_RS11050	-	75451..75576 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
EQH16_RS00485 (EQH16_00495)	-	75984..76178 (+)	195	WP_000756776.1	hypothetical protein	-
EQH16_RS00490 (EQH16_00500)	comR	76199..77092 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
EQH16_RS00495 (EQH16_00505)	-	77635..77931 (+)	297	WP_000837726.1	uberolysin/carnocyclin family circular bacteriocin	-
EQH16_RS00500 (EQH16_00510)	-	77938..79074 (+)	1137	WP_000698828.1	hypothetical protein	-
EQH16_RS00505 (EQH16_00515)	-	79071..79553 (+)	483	WP_001232094.1	stage II sporulation protein M	-
EQH16_RS00510 (EQH16_00520)	-	79550..80146 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
EQH16_RS00515 (EQH16_00525)	-	80127..80618 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=297869 EQH16_RS00490 WP_000343888.1 76199..77092(+) (comR) [Streptococcus pneumoniae strain TVO_1901921]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=297869 EQH16_RS00490 WP_000343888.1 76199..77092(+) (comR) [Streptococcus pneumoniae strain TVO_1901921]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37