Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   BCERKBAB4_RS05900 Genome accession   NC_010184
Coordinates   1174652..1175335 (+) Length   227 a.a.
NCBI ID   WP_002030378.1    Uniprot ID   A0A0A0WR99
Organism   Bacillus mycoides KBAB4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1169652..1180335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCERKBAB4_RS05880 (BcerKBAB4_1095) - 1170636..1172282 (+) 1647 WP_002140829.1 peptide ABC transporter substrate-binding protein -
  BCERKBAB4_RS05885 (BcerKBAB4_1096) - 1172312..1172515 (-) 204 WP_000559981.1 hypothetical protein -
  BCERKBAB4_RS05890 (BcerKBAB4_1097) spx 1173095..1173490 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  BCERKBAB4_RS05895 (BcerKBAB4_1098) - 1173541..1174215 (-) 675 WP_002011349.1 TerC family protein -
  BCERKBAB4_RS05900 (BcerKBAB4_1099) mecA 1174652..1175335 (+) 684 WP_002030378.1 adaptor protein MecA Regulator
  BCERKBAB4_RS05905 (BcerKBAB4_1100) - 1175408..1176952 (+) 1545 WP_012260549.1 cardiolipin synthase -
  BCERKBAB4_RS05910 (BcerKBAB4_1101) - 1177044..1178279 (+) 1236 WP_012260550.1 competence protein CoiA -
  BCERKBAB4_RS05915 (BcerKBAB4_1102) pepF 1178330..1180156 (+) 1827 WP_012260551.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27043.20 Da        Isoelectric Point: 4.0116

>NTDB_id=29786 BCERKBAB4_RS05900 WP_002030378.1 1174652..1175335(+) (mecA) [Bacillus mycoides KBAB4]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQIGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=29786 BCERKBAB4_RS05900 WP_002030378.1 1174652..1175335(+) (mecA) [Bacillus mycoides KBAB4]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAATAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A0WR99

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546


Multiple sequence alignment