Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BCERKBAB4_RS05810 Genome accession   NC_010184
Coordinates   1155975..1156151 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides KBAB4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150975..1161151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCERKBAB4_RS05790 (BcerKBAB4_1077) clpB 1151303..1153903 (+) 2601 WP_002140822.1 ATP-dependent chaperone ClpB -
  BCERKBAB4_RS05795 (BcerKBAB4_1078) - 1153935..1154117 (-) 183 WP_001211111.1 YjzD family protein -
  BCERKBAB4_RS05800 (BcerKBAB4_1079) - 1154274..1155008 (+) 735 WP_002030268.1 hydrolase -
  BCERKBAB4_RS05805 (BcerKBAB4_1080) - 1155038..1155910 (+) 873 WP_012260542.1 NAD-dependent epimerase/dehydratase family protein -
  BCERKBAB4_RS05810 (BcerKBAB4_1081) comZ 1155975..1156151 (+) 177 WP_002011319.1 ComZ family protein Regulator
  BCERKBAB4_RS05815 (BcerKBAB4_1082) fabH 1156579..1157511 (+) 933 WP_002140823.1 beta-ketoacyl-ACP synthase III -
  BCERKBAB4_RS05820 (BcerKBAB4_1083) fabF 1157543..1158781 (+) 1239 WP_002030364.1 beta-ketoacyl-ACP synthase II -
  BCERKBAB4_RS05825 (BcerKBAB4_1084) - 1158897..1159688 (+) 792 WP_002030365.1 DUF2268 domain-containing protein -
  BCERKBAB4_RS05830 (BcerKBAB4_1085) - 1159829..1160575 (+) 747 WP_002030367.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=29783 BCERKBAB4_RS05810 WP_002011319.1 1155975..1156151(+) (comZ) [Bacillus mycoides KBAB4]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=29783 BCERKBAB4_RS05810 WP_002011319.1 1155975..1156151(+) (comZ) [Bacillus mycoides KBAB4]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment