Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   EQH17_RS02605 Genome accession   NZ_CP035263
Coordinates   523087..523353 (+) Length   88 a.a.
NCBI ID   WP_001811621.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1901922     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 518087..528353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH17_RS02585 (EQH17_02780) - 518298..518807 (+) 510 WP_000619950.1 N-acetyltransferase -
  EQH17_RS02590 (EQH17_02785) pheT 518884..521289 (+) 2406 WP_000961567.1 phenylalanine--tRNA ligase subunit beta -
  EQH17_RS02595 (EQH17_02790) - 521357..522358 (-) 1002 WP_000597968.1 endonuclease/exonuclease/phosphatase family protein -
  EQH17_RS02600 (EQH17_02795) - 522514..523002 (+) 489 Protein_521 transposase -
  EQH17_RS02605 (EQH17_02800) HI0659 523087..523353 (+) 267 WP_001811621.1 helix-turn-helix domain-containing protein Machinery gene
  EQH17_RS02610 (EQH17_02805) metE 523614..525863 (+) 2250 WP_000108198.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  EQH17_RS02615 (EQH17_02810) metF 525927..526793 (+) 867 WP_000089990.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9560.13 Da        Isoelectric Point: 4.8274

>NTDB_id=297769 EQH17_RS02605 WP_001811621.1 523087..523353(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901922]
MEGCLSELFSKEEILESDMRVAIMSELIEARNKQGISQKKLEEVSGVSQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=297769 EQH17_RS02605 WP_001811621.1 523087..523353(+) (HI0659) [Streptococcus pneumoniae strain TVO_1901922]
TTGGAAGGATGTCTATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTAGCTATCATGAGCGAGTT
GATTGAAGCCAGAAATAAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAAGTCAGTGGAGTGAGTCAGCCTGTTATAGCTA
GGATGGAGACAGGTAAGACTAGTCCACAGTTGGACACAGTCTTAAAAGTCCTAGCTAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(28-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

61.039

87.5

0.534