Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BCERKBAB4_RS00215 | Genome accession | NC_010184 |
| Coordinates | 40593..40877 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843037.1 | Uniprot ID | A0A366FUU6 |
| Organism | Bacillus mycoides KBAB4 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 35593..45877
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCERKBAB4_RS00180 (BcerKBAB4_0025) | tmk | 35747..36373 (+) | 627 | WP_002009634.1 | dTMP kinase | - |
| BCERKBAB4_RS00185 (BcerKBAB4_0026) | holB | 36409..37392 (+) | 984 | WP_002009636.1 | DNA polymerase III subunit delta' | - |
| BCERKBAB4_RS00190 (BcerKBAB4_0027) | - | 37398..38225 (+) | 828 | WP_002009637.1 | PSP1 domain-containing protein | - |
| BCERKBAB4_RS00195 (BcerKBAB4_0028) | yabA | 38240..38590 (+) | 351 | WP_002009639.1 | DNA replication initiation control protein YabA | - |
| BCERKBAB4_RS00200 (BcerKBAB4_0029) | - | 38711..39451 (+) | 741 | WP_002029328.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BCERKBAB4_RS00205 (BcerKBAB4_0030) | - | 39438..39728 (+) | 291 | WP_002130207.1 | GIY-YIG nuclease family protein | - |
| BCERKBAB4_RS00210 (BcerKBAB4_0031) | rsmI | 39697..40572 (+) | 876 | WP_002143972.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BCERKBAB4_RS00215 (BcerKBAB4_0032) | abrB | 40593..40877 (-) | 285 | WP_000843037.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BCERKBAB4_RS00220 (BcerKBAB4_0033) | metG | 41399..43381 (+) | 1983 | WP_002029324.1 | methionine--tRNA ligase | - |
| BCERKBAB4_RS00225 (BcerKBAB4_0034) | - | 43547..44314 (+) | 768 | WP_002009645.1 | TatD family hydrolase | - |
| BCERKBAB4_RS00230 (BcerKBAB4_0035) | rnmV | 44575..45132 (+) | 558 | WP_002029323.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10476.14 Da Isoelectric Point: 4.7174
>NTDB_id=29772 BCERKBAB4_RS00215 WP_000843037.1 40593..40877(-) (abrB) [Bacillus mycoides KBAB4]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QVLNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=29772 BCERKBAB4_RS00215 WP_000843037.1 40593..40877(-) (abrB) [Bacillus mycoides KBAB4]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTACGTTGATGATGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATCTTTAGCTGAAGGTAAAATTATCTTAAGTAAAGAAGGCGCTGAA
CAAGTCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
84.043 |
100 |
0.84 |